Skip to content
Snippets Groups Projects

Compare revisions

Changes are shown as if the source revision was being merged into the target revision. Learn more about comparing revisions.

Source

Select target project
No results found

Target

Select target project
  • jovicic/covid-19-public-data
  • sofiane.sarni/covid-19-public-data
  • mojulian/covid-19-public-data
  • paul.ronga/covid-19-public-data
  • covid-19/covid-19-public-data
  • orourke/covid-19-public-data
  • marius.mos/covid-19-public-data
  • gava/covid-19-public-data
  • oleg/covid-19-public-data
  • lorenzo.cavazzi.tech/covid-19-public-data
  • dev/covid-19-public-data
  • cp/covid-19-public-data
  • cchoirat/covid-19-public-data
  • nathanael.perraudin/covid-19-public-data
  • robert/covid-19-public-data
  • edana.beauvais/covid-19-public-data
  • emma.jablonski/covid-19-public-data
  • natasa.tagasovska/covid-19-public-data
  • florianvanhorenbeke/covid-19-public-data
  • rok.roskar/covid-19-public-data
  • joze.roskar/covid-19-public-data
  • kumarsum1984/covid-19-public-data
  • mark.kochanek/covid-19-public-data
  • ableuler/covid-19-public-data
  • plamennavenkova/covid-19-public-data
  • hannah.lantermann/covid-19-public-data
  • rok.roskar/covid-19-public-data-new-fork
  • dandrea.cordoba/covid-19-public-data
  • alfredo.chavarria/covid-19-public-data
  • alfredo.chavarria/covid-19-public-data-alfredo
30 results
Show changes
Commits on Source (129)
Showing
with 3231 additions and 426 deletions
......@@ -396,3 +396,17 @@ data/covid-19-chile/covid19_chile_2020-04-11.csv filter=lfs diff=lfs merge=lfs -
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-12-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-13-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-14-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-15-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19-ecdc/covid-19-ecdc.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-16-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19-chile/covid19_chile_2020-04-13.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19-chile/covid19_chile_2020-04-15.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19-chile/covid19_chile_2020-04-16.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19-chile/covid19_chile_2020-04-14.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-17-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19-chile/covid19_chile_2020-04-18.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19-chile/covid19_chile_2020-04-17.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-18-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-19-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-20-2020.csv filter=lfs diff=lfs merge=lfs -text
data/covid-19_jhu-csse/csse_covid_19_daily_reports/04-21-2020.csv filter=lfs diff=lfs merge=lfs -text
......@@ -66,6 +66,7 @@ update:
- renku dataset update covid-19-italy
- renku dataset update covid-19-spain
- renku dataset update covid-19-us-nyt
- renku dataset add covid-19-ecdc -d covid-19-ecdc.csv https://opendata.ecdc.europa.eu/covid19/casedistribution/csv --force || true
- renku dataset add covid-19-chile -s data/*.csv -s data/covid19_chile.rds https://github.com/itoledor/coronavirus.git --force
- renku dataset add covidtracker https://ocgptweb.azurewebsites.net/CSVDownload -d covidtracker.csv --force
- renku rerun data/covidtracking/states-metadata.json data/covidtracking/states-daily.json
......
......@@ -172,7 +172,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/5d77bbb3d92723a71c34da3e93460c1d98e4a189/data/covid-19-italy/dpc-covid19-ita-andamento-nazionale.json
_label: data/covid-19-italy/dpc-covid19-ita-andamento-nazionale.json@c8909f7154cba7f22d88230cc81f1d72ff15ddcc
_label: data/covid-19-italy/dpc-covid19-ita-andamento-nazionale.json@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -199,7 +199,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/7470ab0daaaab0518ae7aa8cc71fd87d5c33ada5/dati-json/dpc-covid19-ita-andamento-nazionale.json
_label: dati-json/dpc-covid19-ita-andamento-nazionale.json@5eae6179bf7fcaf01faf4a130a44450b6dd60f07
_label: dati-json/dpc-covid19-ita-andamento-nazionale.json@e65c421eee8f0eea85326f946f52f34d404c3c0b
_project: null
added: '2020-03-19T10:45:32.448526+00:00'
based_on: null
......@@ -227,7 +227,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/b69963509326683ca9ee686792fd9735111dc5ef/data/covid-19-italy/dpc-covid19-ita-province.json
_label: data/covid-19-italy/dpc-covid19-ita-province.json@c8909f7154cba7f22d88230cc81f1d72ff15ddcc
_label: data/covid-19-italy/dpc-covid19-ita-province.json@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -254,7 +254,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/71b44ac1987457c16a2af5466eeb96c02f45020f/dati-json/dpc-covid19-ita-province.json
_label: dati-json/dpc-covid19-ita-province.json@5eae6179bf7fcaf01faf4a130a44450b6dd60f07
_label: dati-json/dpc-covid19-ita-province.json@e65c421eee8f0eea85326f946f52f34d404c3c0b
_project: null
added: '2020-03-19T10:45:51.627833+00:00'
based_on: null
......@@ -282,7 +282,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/f7fc43ab3c49beaa0c73b1f7f4e421b5163f0add/data/covid-19-italy/dpc-covid19-ita-regioni.json
_label: data/covid-19-italy/dpc-covid19-ita-regioni.json@c8909f7154cba7f22d88230cc81f1d72ff15ddcc
_label: data/covid-19-italy/dpc-covid19-ita-regioni.json@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -309,7 +309,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/71b44ac1987457c16a2af5466eeb96c02f45020f/dati-json/dpc-covid19-ita-regioni.json
_label: dati-json/dpc-covid19-ita-regioni.json@5eae6179bf7fcaf01faf4a130a44450b6dd60f07
_label: dati-json/dpc-covid19-ita-regioni.json@aa64d30b4f214111cec4063c27052db212beedfb
_project: null
added: '2020-03-19T10:46:24.163477+00:00'
based_on: null
......@@ -337,7 +337,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/214fa7d617f2957a734045fba3c01cf145af6649/data/covid-19-italy/dpc-covid19-ita-province.csv
_label: data/covid-19-italy/dpc-covid19-ita-province.csv@c8909f7154cba7f22d88230cc81f1d72ff15ddcc
_label: data/covid-19-italy/dpc-covid19-ita-province.csv@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -364,7 +364,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/8395f2eb33233e2d5785f0c248177263c105cf73/dati-province/dpc-covid19-ita-province.csv
_label: dati-province/dpc-covid19-ita-province.csv@5eae6179bf7fcaf01faf4a130a44450b6dd60f07
_label: dati-province/dpc-covid19-ita-province.csv@e65c421eee8f0eea85326f946f52f34d404c3c0b
_project: null
added: '2020-03-19T10:46:47.013799+00:00'
based_on: null
......@@ -392,7 +392,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/8a04a14a3682521eff2bb0814755a2317f926dce/data/covid-19-italy/dpc-covid19-ita-regioni.csv
_label: data/covid-19-italy/dpc-covid19-ita-regioni.csv@c8909f7154cba7f22d88230cc81f1d72ff15ddcc
_label: data/covid-19-italy/dpc-covid19-ita-regioni.csv@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -419,7 +419,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/c6c0d46c82068c1439857e63f871bae1fda5f92d/dati-regioni/dpc-covid19-ita-regioni.csv
_label: dati-regioni/dpc-covid19-ita-regioni.csv@5eae6179bf7fcaf01faf4a130a44450b6dd60f07
_label: dati-regioni/dpc-covid19-ita-regioni.csv@e65c421eee8f0eea85326f946f52f34d404c3c0b
_project: null
added: '2020-03-19T10:47:00.393956+00:00'
based_on: null
......@@ -447,7 +447,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/2f28b89c0b8580175181291e152ec03ad8d87a51/data/covid-19-italy/dpc-covid19-ita-andamento-nazionale.csv
_label: data/covid-19-italy/dpc-covid19-ita-andamento-nazionale.csv@c8909f7154cba7f22d88230cc81f1d72ff15ddcc
_label: data/covid-19-italy/dpc-covid19-ita-andamento-nazionale.csv@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -474,7 +474,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/7470ab0daaaab0518ae7aa8cc71fd87d5c33ada5/dati-andamento-nazionale/dpc-covid19-ita-andamento-nazionale.csv
_label: dati-andamento-nazionale/dpc-covid19-ita-andamento-nazionale.csv@5eae6179bf7fcaf01faf4a130a44450b6dd60f07
_label: dati-andamento-nazionale/dpc-covid19-ita-andamento-nazionale.csv@e65c421eee8f0eea85326f946f52f34d404c3c0b
_project: null
added: '2020-03-19T10:47:15.130679+00:00'
based_on: null
......@@ -502,7 +502,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/d0b8e0d440de1d96cf57e35c9a47a2699d6f5106/data/covid-19-italy/dati-andamento-nazionale-description.json
_label: data/covid-19-italy/dati-andamento-nazionale-description.json@c5ef0ac9348e7efeab9c7e12b9209096c6f562ba
_label: data/covid-19-italy/dati-andamento-nazionale-description.json@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -529,7 +529,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/bea52c91028eb7131c645d93fb633555c768405a/dati-andamento-nazionale/dati-andamento-nazionale-description.json
_label: dati-andamento-nazionale/dati-andamento-nazionale-description.json@40ba5d8a8767a0ceb0f74d1cbe951b4e13e5c9e0
_label: dati-andamento-nazionale/dati-andamento-nazionale-description.json@d16e7b5ef1e23e0dab2108b4220c406355c238c4
_project: null
added: '2020-03-22T21:42:08.484068+00:00'
based_on: null
......@@ -557,7 +557,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/f1d2951e579144735588f5810bdf7f433c41cc13/data/covid-19-italy/dati-regioni-description.json
_label: data/covid-19-italy/dati-regioni-description.json@c5ef0ac9348e7efeab9c7e12b9209096c6f562ba
_label: data/covid-19-italy/dati-regioni-description.json@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -584,7 +584,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/bea52c91028eb7131c645d93fb633555c768405a/dati-regioni/dati-regioni-description.json
_label: dati-regioni/dati-regioni-description.json@40ba5d8a8767a0ceb0f74d1cbe951b4e13e5c9e0
_label: dati-regioni/dati-regioni-description.json@d16e7b5ef1e23e0dab2108b4220c406355c238c4
_project: null
added: '2020-03-22T21:42:37.536554+00:00'
based_on: null
......@@ -612,7 +612,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/2faeb464d32751d89a4d1426b741d65a7fcee263/data/covid-19-italy/dati-province-description.json
_label: data/covid-19-italy/dati-province-description.json@cfcfc6a1d5f5d0168bfc920c88fd2f3aa949f9a0
_label: data/covid-19-italy/dati-province-description.json@1d7b7fabf6c1856eba7e3dc95574a6ab35eb7d82
_project:
'@type':
- prov:Location
......@@ -639,7 +639,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/bea52c91028eb7131c645d93fb633555c768405a/dati-province/dati-province-description.json
_label: dati-province/dati-province-description.json@fe0ee4e99f9927e76be4a7bc3cc8c655e25d2a6d
_label: dati-province/dati-province-description.json@d16e7b5ef1e23e0dab2108b4220c406355c238c4
_project: null
added: '2020-03-22T21:43:03.933827+00:00'
based_on: null
......
......@@ -171,7 +171,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/nacional_covid19.csv
_label: data/covid-19-spain/nacional_covid19.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/nacional_covid19.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -198,7 +198,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/58d96d8ce648eefd56c70bfd5349b308bf11420a/COVID 19/nacional_covid19.csv
_label: COVID 19/nacional_covid19.csv@5e9e39d2afd8960420b29bfb1ccc3ad0459f125b
_label: COVID 19/nacional_covid19.csv@3e014caaa3c52a6b47e055b825cc9ae0b026a093
_project: null
added: '2020-03-26T16:21:45.569123+00:00'
based_on: null
......@@ -289,7 +289,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_altas.csv
_label: data/covid-19-spain/ccaa_covid19_altas.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_altas.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -316,7 +316,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/7d723ea87a847a4d98389f3d7f8c8e5ecf99b39e/COVID 19/ccaa_covid19_altas.csv
_label: COVID 19/ccaa_covid19_altas.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_altas.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:45.612885+00:00'
based_on: null
......@@ -371,7 +371,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_fallecidos.csv
_label: data/covid-19-spain/ccaa_covid19_fallecidos.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_fallecidos.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -398,7 +398,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/7d723ea87a847a4d98389f3d7f8c8e5ecf99b39e/COVID 19/ccaa_covid19_fallecidos.csv
_label: COVID 19/ccaa_covid19_fallecidos.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_fallecidos.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:45.661075+00:00'
based_on: null
......@@ -453,7 +453,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_uci.csv
_label: data/covid-19-spain/ccaa_covid19_uci.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_uci.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -480,7 +480,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/7d723ea87a847a4d98389f3d7f8c8e5ecf99b39e/COVID 19/ccaa_covid19_uci.csv
_label: COVID 19/ccaa_covid19_uci.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_uci.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:45.708514+00:00'
based_on: null
......@@ -535,7 +535,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_hospitalizados.csv
_label: data/covid-19-spain/ccaa_covid19_hospitalizados.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_hospitalizados.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -562,7 +562,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/eb5496758d98ef56208c3db32588bbf90051d831/COVID 19/ccaa_covid19_hospitalizados.csv
_label: COVID 19/ccaa_covid19_hospitalizados.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_hospitalizados.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:45.758100+00:00'
based_on: null
......@@ -599,7 +599,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_hospitalizados_long.csv
_label: data/covid-19-spain/ccaa_covid19_hospitalizados_long.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_hospitalizados_long.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -626,7 +626,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/c86c9a2fa1c4bd3a0809c400b76598893e7f3fe0/COVID 19/ccaa_covid19_hospitalizados_long.csv
_label: COVID 19/ccaa_covid19_hospitalizados_long.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_hospitalizados_long.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:45.806990+00:00'
based_on: null
......@@ -727,7 +727,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_casos_long.csv
_label: data/covid-19-spain/ccaa_covid19_casos_long.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_casos_long.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -754,7 +754,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/c86c9a2fa1c4bd3a0809c400b76598893e7f3fe0/COVID 19/ccaa_covid19_casos_long.csv
_label: COVID 19/ccaa_covid19_casos_long.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_casos_long.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:45.899093+00:00'
based_on: null
......@@ -827,7 +827,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/nacional_covid19_rango_edad.csv
_label: data/covid-19-spain/nacional_covid19_rango_edad.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/nacional_covid19_rango_edad.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -854,7 +854,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/21eb603844468cb5454f126aeeec4f18753c898a/COVID 19/nacional_covid19_rango_edad.csv
_label: COVID 19/nacional_covid19_rango_edad.csv@4d5e2baf4c8fb060d2f1fcc1f7fdc75ab711e958
_label: COVID 19/nacional_covid19_rango_edad.csv@3cb93b15ac45eefe4459e31da35369a6e50d966a
_project: null
added: '2020-03-26T16:21:45.950327+00:00'
based_on: null
......@@ -955,7 +955,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_fallecidos_long.csv
_label: data/covid-19-spain/ccaa_covid19_fallecidos_long.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_fallecidos_long.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -982,7 +982,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/c86c9a2fa1c4bd3a0809c400b76598893e7f3fe0/COVID 19/ccaa_covid19_fallecidos_long.csv
_label: COVID 19/ccaa_covid19_fallecidos_long.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_fallecidos_long.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:46.050372+00:00'
based_on: null
......@@ -1055,7 +1055,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_altas_long.csv
_label: data/covid-19-spain/ccaa_covid19_altas_long.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_altas_long.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -1082,7 +1082,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/c86c9a2fa1c4bd3a0809c400b76598893e7f3fe0/COVID 19/ccaa_covid19_altas_long.csv
_label: COVID 19/ccaa_covid19_altas_long.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_altas_long.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:46.099110+00:00'
based_on: null
......@@ -1155,7 +1155,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_uci_long.csv
_label: data/covid-19-spain/ccaa_covid19_uci_long.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_uci_long.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -1182,7 +1182,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/c86c9a2fa1c4bd3a0809c400b76598893e7f3fe0/COVID 19/ccaa_covid19_uci_long.csv
_label: COVID 19/ccaa_covid19_uci_long.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_uci_long.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:46.152810+00:00'
based_on: null
......@@ -1255,7 +1255,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/deee6e09be393f17dfcb1843d330e20c707c0ef1/data/covid-19-spain/ccaa_covid19_casos.csv
_label: data/covid-19-spain/ccaa_covid19_casos.csv@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/ccaa_covid19_casos.csv@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -1282,7 +1282,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/7d723ea87a847a4d98389f3d7f8c8e5ecf99b39e/COVID 19/ccaa_covid19_casos.csv
_label: COVID 19/ccaa_covid19_casos.csv@ba833c8c38ff081967eb8c4ab443e0365ce55b67
_label: COVID 19/ccaa_covid19_casos.csv@026a6fd70b6d9fb42f3afd99c744d767550dfe45
_project: null
added: '2020-03-26T16:21:46.201886+00:00'
based_on: null
......@@ -1337,7 +1337,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/a0d23b31e602180ffb69372f1f640cfbce35b7c7/data/covid-19-spain/readme.md
_label: data/covid-19-spain/readme.md@9d2cd0ae52a85810b83cd876369614bc715e605a
_label: data/covid-19-spain/readme.md@8b49ad508a94c3ef4b7377a54599193f1c4e86a0
_project:
'@type':
- prov:Location
......@@ -1364,7 +1364,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/3908c605422b519a13b958a72e30fe6907d162c6/COVID 19/readme.md
_label: COVID 19/readme.md@4837906d26739a82d4b46be63a95fa6e1f4d5e46
_label: COVID 19/readme.md@c46bcbb7cf2e27422fd3e0947ce41bd76cd6fc5d
_project: null
added: '2020-03-26T16:22:23.464764+00:00'
based_on: null
......
'@context':
'@version': 1.1
_id: '@id'
_project:
'@context':
'@version': 1.1
_id: '@id'
created: schema:dateCreated
creator:
'@context':
'@version': 1.1
_id: '@id'
affiliation: schema:affiliation
alternate_name: schema:alternateName
email: schema:email
label: rdfs:label
name: schema:name
prov: http://www.w3.org/ns/prov#
rdfs: http://www.w3.org/2000/01/rdf-schema#
schema: http://schema.org/
'@id': schema:creator
name: schema:name
prov: http://www.w3.org/ns/prov#
schema: http://schema.org/
updated: schema:dateUpdated
version: schema:schemaVersion
'@id': schema:isPartOf
created: schema:dateCreated
creator:
'@context':
'@version': 1.1
_id: '@id'
affiliation: schema:affiliation
alternate_name: schema:alternateName
email: schema:email
label: rdfs:label
name: schema:name
prov: http://www.w3.org/ns/prov#
rdfs: http://www.w3.org/2000/01/rdf-schema#
schema: http://schema.org/
'@id': schema:creator
date_published: schema:datePublished
description: schema:description
files:
'@context':
'@version': 1.1
_id: '@id'
_project:
'@context':
'@version': 1.1
_id: '@id'
created: schema:dateCreated
creator:
'@context':
'@version': 1.1
_id: '@id'
affiliation: schema:affiliation
alternate_name: schema:alternateName
email: schema:email
label: rdfs:label
name: schema:name
prov: http://www.w3.org/ns/prov#
rdfs: http://www.w3.org/2000/01/rdf-schema#
schema: http://schema.org/
'@id': schema:creator
name: schema:name
prov: http://www.w3.org/ns/prov#
schema: http://schema.org/
updated: schema:dateUpdated
version: schema:schemaVersion
'@id': schema:isPartOf
added: schema:dateCreated
based_on: schema:isBasedOn
creator:
'@context':
'@version': 1.1
_id: '@id'
affiliation: schema:affiliation
alternate_name: schema:alternateName
email: schema:email
label: rdfs:label
name: schema:name
prov: http://www.w3.org/ns/prov#
rdfs: http://www.w3.org/2000/01/rdf-schema#
schema: http://schema.org/
'@id': schema:creator
name: schema:name
path: prov:atLocation
prov: http://www.w3.org/ns/prov#
schema: http://schema.org/
url: schema:url
wfprov: http://purl.org/wf4ever/wfprov#
'@id': schema:hasPart
identifier: schema:identifier
in_language:
'@context':
'@version': 1.1
alternate_name: schema:alternateName
name: schema:name
schema: http://schema.org/
'@id': schema:inLanguage
keywords: schema:keywords
license: schema:license
name: schema:name
path: prov:atLocation
prov: http://www.w3.org/ns/prov#
same_as:
'@context':
'@version': 1.1
_id: '@id'
schema: http://schema.org/
url: schema:url
'@id': schema:sameAs
schema: http://schema.org/
short_name: schema:alternateName
tags:
'@context':
'@version': 1.1
_id: '@id'
commit: schema:location
created: schema:startDate
dataset: schema:about
description: schema:description
name: schema:name
schema: http://schema.org/
'@id': schema:subjectOf
url: schema:url
version: schema:version
wfprov: http://purl.org/wf4ever/wfprov#
'@type':
- prov:Entity
- schema:Dataset
- wfprov:Artifact
_id: https://renkulab.io/datasets/78a35752-cc00-443d-8ed8-e37a82599099
_label: 78a35752-cc00-443d-8ed8-e37a82599099
_project:
'@type':
- prov:Location
- schema:Project
_id: https://renkulab.io/projects/covid-19/covid-19-public-data
created: '2020-03-11T21:43:12.736000+00:00'
creator:
'@type':
- prov:Person
- schema:Person
_id: mailto:cramakri@ethz.ch
affiliation: null
alternate_name: null
email: cramakri@ethz.ch
label: Chandrasekhar Ramakrishnan
name: Chandrasekhar Ramakrishnan
name: covid-19-dashboard
updated: '2020-03-11T21:43:12.736000+00:00'
version: '3'
created: '2020-04-15T20:38:37.673392+00:00'
creator:
- '@type':
- prov:Person
- schema:Person
_id: mailto:rokroskar@gmail.com
affiliation: null
alternate_name: null
email: rokroskar@gmail.com
label: Rok Roskar
name: Rok Roskar
date_published: null
description: 'Worldwide COVID-19 cases collected by the ECDC. Source: https://www.ecdc.europa.eu/en/publications-data/download-todays-data-geographic-distribution-covid-19-cases-worldwide'
files:
- '@type':
- prov:Entity
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/81cd96cb918d9961619f2fa7fd4e7ae4f1ae77ba/data/covid-19-ecdc/covid-19-ecdc.csv
_label: data/covid-19-ecdc/covid-19-ecdc.csv@c4652249909707147e11e91dca6eb6037505c7f3
_project:
'@type':
- prov:Location
- schema:Project
_id: https://localhost/projects/cramakri/covid-19-dashboard
created: '2020-03-11T21:43:12.736000+00:00'
creator:
'@type':
- prov:Person
- schema:Person
_id: mailto:cramakri@ethz.ch
affiliation: null
alternate_name: null
email: cramakri@ethz.ch
label: Chandrasekhar Ramakrishnan
name: Chandrasekhar Ramakrishnan
name: covid-19-dashboard
updated: '2020-03-11T21:43:12.736000+00:00'
version: '3'
added: '2020-04-15T20:38:48.076356+00:00'
based_on: null
creator:
- '@type':
- prov:Person
- schema:Person
_id: mailto:rokroskar@gmail.com
affiliation: null
alternate_name: null
email: rokroskar@gmail.com
label: Rok Roskar
name: Rok Roskar
external: false
name: covid-19-ecdc.csv
path: data/covid-19-ecdc/covid-19-ecdc.csv
url: https://opendata.ecdc.europa.eu/covid19/casedistribution/csv
identifier: 78a35752-cc00-443d-8ed8-e37a82599099
in_language: null
keywords: []
license: null
name: covid-19-ecdc
path: .renku/datasets/78a35752-cc00-443d-8ed8-e37a82599099
same_as: null
short_name: covid-19-ecdc
tags: []
url: https://renkulab.io/datasets/78a35752-cc00-443d-8ed8-e37a82599099
version: null
......@@ -175,7 +175,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/35eabe40c5ed61f49ce9467eea2c5906bf3ceeff/data/covidtracker/covidtracker.csv
_label: data/covidtracker/covidtracker.csv@628e8b28904e0c55540c339d9c2da55e0c01720a
_label: data/covidtracker/covidtracker.csv@ffdf7468eca12e0ea471aff063786995fc5c7b59
_project:
'@type':
- prov:Location
......
......@@ -172,7 +172,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/b3a6a0b807c4c50ef89daf0c4fe5c42bee10805e/data/covid-19-us-nyt/us-counties.csv
_label: data/covid-19-us-nyt/us-counties.csv@db373f617e659ae6253a2f0e43be34d92d31f43d
_label: data/covid-19-us-nyt/us-counties.csv@44c57c5be10fae693384d6afcfac0e6ab0ea5a56
_project:
'@type':
- prov:Location
......@@ -199,7 +199,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/6958d2ddf886345c99a3148a031d6bc676343150/us-counties.csv
_label: us-counties.csv@47d4ce01d41eb4b007133840985f53155ce61570
_label: us-counties.csv@7b16e9a86f098aded835a688e1115c551abc0c53
_project: null
added: '2020-04-09T08:01:24.598142+00:00'
based_on: null
......@@ -300,7 +300,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/b3a6a0b807c4c50ef89daf0c4fe5c42bee10805e/data/covid-19-us-nyt/us-states.csv
_label: data/covid-19-us-nyt/us-states.csv@db373f617e659ae6253a2f0e43be34d92d31f43d
_label: data/covid-19-us-nyt/us-states.csv@44c57c5be10fae693384d6afcfac0e6ab0ea5a56
_project:
'@type':
- prov:Location
......@@ -327,7 +327,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/6958d2ddf886345c99a3148a031d6bc676343150/us-states.csv
_label: us-states.csv@47d4ce01d41eb4b007133840985f53155ce61570
_label: us-states.csv@7b16e9a86f098aded835a688e1115c551abc0c53
_project: null
added: '2020-04-09T08:01:24.640997+00:00'
based_on: null
......@@ -364,7 +364,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://renkulab.io/blob/b3a6a0b807c4c50ef89daf0c4fe5c42bee10805e/data/covid-19-us-nyt/README.md
_label: data/covid-19-us-nyt/README.md@db373f617e659ae6253a2f0e43be34d92d31f43d
_label: data/covid-19-us-nyt/README.md@44c57c5be10fae693384d6afcfac0e6ab0ea5a56
_project:
'@type':
- prov:Location
......@@ -391,7 +391,7 @@ files:
- schema:DigitalDocument
- wfprov:Artifact
_id: https://github.com/blob/ed2e75b16556ae31484f9d764606d675496e970a/README.md
_label: README.md@ced6716d0e68f484a76370e9e4482b534e50c1d2
_label: README.md@e1237a9e57fe2c485cc86559e894543f3533c797
_project: null
added: '2020-04-09T08:01:24.662228+00:00'
based_on: null
......
../../datasets/78a35752-cc00-443d-8ed8-e37a82599099/metadata.yml
\ No newline at end of file
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default:
class: File
path: ../../notebooks/covidtracking.ipynb
streamable: false
type: File
input_10:
default:
class: Directory
listing: []
path: ../../data/covid-19_jhu-csse
streamable: false
type: Directory
input_11:
default: rates_folder
streamable: false
type: string
input_12:
default:
class: Directory
listing: []
path: ../../data/covid-19_rates
streamable: false
type: Directory
input_13:
default: geodata_path
streamable: false
type: string
input_14:
default:
class: File
path: ../../data/geodata/geo_data.csv
streamable: false
type: File
input_15:
default: atlas_path
streamable: false
type: string
input_16:
default:
class: Directory
listing: []
path: ../../data/atlas
streamable: false
type: Directory
input_17:
default:
class: File
path: ../../notebooks/openzh-covid-19.ipynb
streamable: false
type: File
input_18:
default:
class: Directory
listing: []
path: ../../data/atlas
streamable: false
type: Directory
input_19:
default: runs/openzh-covid-19.run.ipynb
streamable: false
type: string
input_2:
default: runs/covidtracking.run.ipynb
streamable: false
type: string
input_20:
default: save_figures
streamable: false
type: string
input_21:
default: 'True'
streamable: false
type: string
input_22:
default: data_path
streamable: false
type: string
input_23:
default:
class: Directory
listing: []
path: ../../data/openzh-covid-19
streamable: false
type: Directory
input_24:
default: figures_path
streamable: false
type: string
input_25:
default: figures
streamable: false
type: string
input_26:
default: atlas_path
streamable: false
type: string
input_3:
default: data_path
streamable: false
type: string
input_4:
default:
class: Directory
listing: []
path: ../../data/covidtracking
streamable: false
type: Directory
input_5:
default: atlas_path
streamable: false
type: string
input_6:
default:
class: Directory
listing: []
path: ../../data/atlas
streamable: false
type: Directory
input_7:
default:
class: File
path: ../../notebooks/Dashboard.ipynb
streamable: false
type: File
input_8:
default: runs/Dashboard.run.ipynb
streamable: false
type: string
input_9:
default: ts_folder
streamable: false
type: string
outputs:
output_0:
outputSource: step_3/output_1
streamable: false
type: Directory
output_1:
outputSource: step_2/output_0
streamable: false
type: File
output_2:
outputSource: step_1/output_0
streamable: false
type: File
output_3:
outputSource: step_3/output_0
streamable: false
type: File
requirements: []
steps:
step_1:
in:
input_1: input_1
input_2: input_2
input_3: input_3
input_4: input_4
input_5: input_5
input_6: input_6
out:
- output_0
run: 2fba4568d8784fb99872b6c8a35f66b9_papermill.cwl
step_2:
in:
input_10: input_7
input_11: input_8
input_2: input_9
input_3: input_10
input_4: input_11
input_5: input_12
input_6: input_13
input_7: input_14
input_8: input_15
input_9: input_16
out:
- output_0
run: edeae7a3f9bd41579941a5f9b0eaf2aa_papermill.cwl
step_3:
in:
input_1: input_17
input_10: input_18
input_2: input_19
input_3: input_20
input_4: input_21
input_5: input_22
input_6: input_23
input_7: input_24
input_8: input_25
input_9: input_26
out:
- output_1
- output_0
run: d03bdcf1bad440d7ad5010cd182358d1_papermill.cwl
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default: states-daily.json
streamable: false
type: string
input_2:
default: out_folder
streamable: false
type: string
input_3:
default: data/covidtracking
streamable: false
type: string
input_4:
default:
class: File
path: ../../notebooks/process/download-covidtracking-data.ipynb
streamable: false
type: File
input_5:
default: runs/download-covidtracking-data.runs.ipynb
streamable: false
type: string
input_6:
default: states-metadata.json
streamable: false
type: string
outputs:
output_0:
outputSource: step_2/output_0
streamable: false
type: File
output_1:
outputSource: step_2/output_1
streamable: false
type: Directory
requirements: []
steps:
step_1:
in:
filename: input_1
input_directory: step_2/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-daily.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- &id001
class: InlineJavascriptRequirement
- &id002
class: InitialWorkDirRequirement
listing: $(inputs.input_directory.listing)
successCodes: []
temporaryFailCodes: []
step_2:
in:
input_1: input_2
input_2: input_3
input_3: input_4
input_4: input_5
out:
- output_0
- output_1
run: a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl
step_3:
in:
filename: input_6
input_directory: step_2/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-metadata.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- *id001
- *id002
successCodes: []
temporaryFailCodes: []
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default: out_folder
streamable: false
type: string
input_2:
default: data/covidtracking
streamable: false
type: string
input_3:
default:
class: File
path: ../../notebooks/process/download-covidtracking-data.ipynb
streamable: false
type: File
input_4:
default: runs/download-covidtracking-data.runs.ipynb
streamable: false
type: string
input_5:
default: states-metadata.json
streamable: false
type: string
input_6:
default: states-daily.json
streamable: false
type: string
outputs:
output_0:
outputSource: step_1/output_1
streamable: false
type: Directory
output_3:
outputSource: step_1/output_0
streamable: false
type: File
requirements: []
steps:
step_1:
in:
input_1: input_1
input_2: input_2
input_3: input_3
input_4: input_4
out:
- output_1
- output_0
run: a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl
step_2:
in:
filename: input_5
input_directory: step_1/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-metadata.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- &id001
class: InlineJavascriptRequirement
- &id002
class: InitialWorkDirRequirement
listing: $(inputs.input_directory.listing)
successCodes: []
temporaryFailCodes: []
step_3:
in:
filename: input_6
input_directory: step_1/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-daily.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- *id001
- *id002
successCodes: []
temporaryFailCodes: []
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default:
class: File
path: ../../notebooks/covidtracking.ipynb
streamable: false
type: File
input_10:
default:
class: Directory
listing: []
path: ../../data/covid-19_jhu-csse
streamable: false
type: Directory
input_11:
default: rates_folder
streamable: false
type: string
input_12:
default:
class: Directory
listing: []
path: ../../data/covid-19_rates
streamable: false
type: Directory
input_13:
default: geodata_path
streamable: false
type: string
input_14:
default:
class: File
path: ../../data/geodata/geo_data.csv
streamable: false
type: File
input_15:
default: atlas_path
streamable: false
type: string
input_16:
default:
class: Directory
listing: []
path: ../../data/atlas
streamable: false
type: Directory
input_17:
default:
class: File
path: ../../notebooks/openzh-covid-19.ipynb
streamable: false
type: File
input_18:
default:
class: Directory
listing: []
path: ../../data/atlas
streamable: false
type: Directory
input_19:
default: runs/openzh-covid-19.run.ipynb
streamable: false
type: string
input_2:
default: runs/covidtracking.run.ipynb
streamable: false
type: string
input_20:
default: save_figures
streamable: false
type: string
input_21:
default: 'True'
streamable: false
type: string
input_22:
default: data_path
streamable: false
type: string
input_23:
default:
class: Directory
listing: []
path: ../../data/openzh-covid-19
streamable: false
type: Directory
input_24:
default: figures_path
streamable: false
type: string
input_25:
default: figures
streamable: false
type: string
input_26:
default: atlas_path
streamable: false
type: string
input_27:
default:
class: File
path: ../../notebooks/covid-19-us-nyt.ipynb
streamable: false
type: File
input_28:
default: runs/covid-19-us-nyt.run.ipynb
streamable: false
type: string
input_29:
default: data_path
streamable: false
type: string
input_3:
default: data_path
streamable: false
type: string
input_30:
default:
class: Directory
listing: []
path: ../../data/covid-19-us-nyt
streamable: false
type: Directory
input_31:
default: italy_data_path
streamable: false
type: string
input_32:
default:
class: File
path: ../../data/covid-19-italy/dpc-covid19-ita-regioni.csv
streamable: false
type: File
input_33:
default: atlas_path
streamable: false
type: string
input_34:
default:
class: Directory
listing: []
path: ../../data/atlas
streamable: false
type: Directory
input_35:
default:
class: File
path: ../../notebooks/covid-19-italy.ipynb
streamable: false
type: File
input_36:
default: runs/covid-19-italy.run.ipynb
streamable: false
type: string
input_37:
default: data_folder
streamable: false
type: string
input_38:
default:
class: Directory
listing: []
path: ../../data/covid-19-italy
streamable: false
type: Directory
input_4:
default:
class: Directory
listing: []
path: ../../data/covidtracking
streamable: false
type: Directory
input_5:
default: atlas_path
streamable: false
type: string
input_6:
default:
class: Directory
listing: []
path: ../../data/atlas
streamable: false
type: Directory
input_7:
default:
class: File
path: ../../notebooks/Dashboard.ipynb
streamable: false
type: File
input_8:
default: runs/Dashboard.run.ipynb
streamable: false
type: string
input_9:
default: ts_folder
streamable: false
type: string
outputs:
output_0:
outputSource: step_3/output_0
streamable: false
type: File
output_1:
outputSource: step_2/output_0
streamable: false
type: File
output_2:
outputSource: step_3/output_1
streamable: false
type: Directory
output_3:
outputSource: step_1/output_0
streamable: false
type: File
output_4:
outputSource: step_5/output_0
streamable: false
type: File
output_5:
outputSource: step_4/output_0
streamable: false
type: File
requirements: []
steps:
step_1:
in:
input_1: input_1
input_2: input_2
input_3: input_3
input_4: input_4
input_5: input_5
input_6: input_6
out:
- output_0
run: 2fba4568d8784fb99872b6c8a35f66b9_papermill.cwl
step_2:
in:
input_10: input_7
input_11: input_8
input_2: input_9
input_3: input_10
input_4: input_11
input_5: input_12
input_6: input_13
input_7: input_14
input_8: input_15
input_9: input_16
out:
- output_0
run: edeae7a3f9bd41579941a5f9b0eaf2aa_papermill.cwl
step_3:
in:
input_1: input_17
input_10: input_18
input_2: input_19
input_3: input_20
input_4: input_21
input_5: input_22
input_6: input_23
input_7: input_24
input_8: input_25
input_9: input_26
out:
- output_1
- output_0
run: d03bdcf1bad440d7ad5010cd182358d1_papermill.cwl
step_4:
in:
input_1: input_27
input_2: input_28
input_3: input_29
input_4: input_30
input_5: input_31
input_6: input_32
input_7: input_33
input_8: input_34
out:
- output_0
run: 66502cc19ea049fcb7695c2f8b34d0f9_papermill.cwl
step_5:
in:
input_1: input_35
input_2: input_36
input_3: input_37
input_4: input_38
out:
- output_0
run: 4a3366aed5154987aa505ac946f1e25a_papermill.cwl
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default: states-daily.json
streamable: false
type: string
input_2:
default: out_folder
streamable: false
type: string
input_3:
default: data/covidtracking
streamable: false
type: string
input_4:
default:
class: File
path: ../../notebooks/process/download-covidtracking-data.ipynb
streamable: false
type: File
input_5:
default: runs/download-covidtracking-data.runs.ipynb
streamable: false
type: string
input_6:
default: states-metadata.json
streamable: false
type: string
outputs:
output_1:
outputSource: step_2/output_0
streamable: false
type: File
output_2:
outputSource: step_2/output_1
streamable: false
type: Directory
requirements: []
steps:
step_1:
in:
filename: input_1
input_directory: step_2/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-daily.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- &id001
class: InlineJavascriptRequirement
- &id002
class: InitialWorkDirRequirement
listing: $(inputs.input_directory.listing)
successCodes: []
temporaryFailCodes: []
step_2:
in:
input_1: input_2
input_2: input_3
input_3: input_4
input_4: input_5
out:
- output_1
- output_0
run: a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl
step_3:
in:
filename: input_6
input_directory: step_2/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-metadata.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- *id001
- *id002
successCodes: []
temporaryFailCodes: []
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default: states-metadata.json
streamable: false
type: string
input_2:
default: states-daily.json
streamable: false
type: string
input_3:
default: out_folder
streamable: false
type: string
input_4:
default: data/covidtracking
streamable: false
type: string
input_5:
default:
class: File
path: ../../notebooks/process/download-covidtracking-data.ipynb
streamable: false
type: File
input_6:
default: runs/download-covidtracking-data.runs.ipynb
streamable: false
type: string
outputs:
output_1:
outputSource: step_3/output_0
streamable: false
type: File
output_2:
outputSource: step_3/output_1
streamable: false
type: Directory
requirements: []
steps:
step_1:
in:
filename: input_1
input_directory: step_3/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-metadata.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- &id001
class: InlineJavascriptRequirement
- &id002
class: InitialWorkDirRequirement
listing: $(inputs.input_directory.listing)
successCodes: []
temporaryFailCodes: []
step_2:
in:
filename: input_2
input_directory: step_3/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-daily.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- *id001
- *id002
successCodes: []
temporaryFailCodes: []
step_3:
in:
input_1: input_3
input_2: input_4
input_3: input_5
input_4: input_6
out:
- output_0
- output_1
run: a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl
This diff is collapsed.
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default:
class: File
path: ../../notebooks/covid-19-italy.ipynb
streamable: false
type: File
input_2:
default: runs/covid-19-italy.run.ipynb
streamable: false
type: string
input_3:
default: data_folder
streamable: false
type: string
input_4:
default:
class: Directory
listing: []
path: ../../data/covid-19-italy
streamable: false
type: Directory
outputs:
output_0:
outputSource: step_1/output_0
streamable: false
type: File
requirements: []
steps:
step_1:
in:
input_1: input_1
input_2: input_2
input_3: input_3
input_4: input_4
out:
- output_0
run: 4a3366aed5154987aa505ac946f1e25a_papermill.cwl
This diff is collapsed.