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Commit c640916d authored by Rok Roškar's avatar Rok Roškar Committed by renku 0.15.1
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renku migrate: committing migrated workflow

parent 7d1c3053
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1 merge request!398migrate to newest version of renku
...@@ -225,6 +225,8 @@ data/covidtracking: ...@@ -225,6 +225,8 @@ data/covidtracking:
- .renku/workflow/bd2fe65abcff4165834b580185928246_migrated.yaml - .renku/workflow/bd2fe65abcff4165834b580185928246_migrated.yaml
4597cd96a8c52ccc007d7402321877b4e9bf9a01: 4597cd96a8c52ccc007d7402321877b4e9bf9a01:
- .renku/workflow/4cc1b9a77a354e8f8219056e84a633f2_migrated.yaml - .renku/workflow/4cc1b9a77a354e8f8219056e84a633f2_migrated.yaml
46e3de8333eb35561a51d197fc399394280641ef:
- .renku/workflow/497cd4459fde4d798e9723d84afedb4e_migrated.yaml
47453a88e9f9dbbc5275eb26e07ab9bc2977b8c3: 47453a88e9f9dbbc5275eb26e07ab9bc2977b8c3:
- .renku/workflow/db21913cec114a52ad19fab1b37aa483_migrated.yaml - .renku/workflow/db21913cec114a52ad19fab1b37aa483_migrated.yaml
48416bc931a3f0443cf2d3b159d3ff11a58723ab: 48416bc931a3f0443cf2d3b159d3ff11a58723ab:
...@@ -711,6 +713,8 @@ data/covidtracking/states-daily.json: ...@@ -711,6 +713,8 @@ data/covidtracking/states-daily.json:
- .renku/workflow/bd2fe65abcff4165834b580185928246_migrated.yaml - .renku/workflow/bd2fe65abcff4165834b580185928246_migrated.yaml
4597cd96a8c52ccc007d7402321877b4e9bf9a01: 4597cd96a8c52ccc007d7402321877b4e9bf9a01:
- .renku/workflow/4cc1b9a77a354e8f8219056e84a633f2_migrated.yaml - .renku/workflow/4cc1b9a77a354e8f8219056e84a633f2_migrated.yaml
46e3de8333eb35561a51d197fc399394280641ef:
- .renku/workflow/497cd4459fde4d798e9723d84afedb4e_migrated.yaml
47453a88e9f9dbbc5275eb26e07ab9bc2977b8c3: 47453a88e9f9dbbc5275eb26e07ab9bc2977b8c3:
- .renku/workflow/db21913cec114a52ad19fab1b37aa483_migrated.yaml - .renku/workflow/db21913cec114a52ad19fab1b37aa483_migrated.yaml
48416bc931a3f0443cf2d3b159d3ff11a58723ab: 48416bc931a3f0443cf2d3b159d3ff11a58723ab:
...@@ -1192,6 +1196,8 @@ data/covidtracking/states-metadata.json: ...@@ -1192,6 +1196,8 @@ data/covidtracking/states-metadata.json:
- .renku/workflow/bd2fe65abcff4165834b580185928246_migrated.yaml - .renku/workflow/bd2fe65abcff4165834b580185928246_migrated.yaml
4597cd96a8c52ccc007d7402321877b4e9bf9a01: 4597cd96a8c52ccc007d7402321877b4e9bf9a01:
- .renku/workflow/4cc1b9a77a354e8f8219056e84a633f2_migrated.yaml - .renku/workflow/4cc1b9a77a354e8f8219056e84a633f2_migrated.yaml
46e3de8333eb35561a51d197fc399394280641ef:
- .renku/workflow/497cd4459fde4d798e9723d84afedb4e_migrated.yaml
47453a88e9f9dbbc5275eb26e07ab9bc2977b8c3: 47453a88e9f9dbbc5275eb26e07ab9bc2977b8c3:
- .renku/workflow/db21913cec114a52ad19fab1b37aa483_migrated.yaml - .renku/workflow/db21913cec114a52ad19fab1b37aa483_migrated.yaml
487ddcbff2122ea0731d7030a53a30e1f8253c64: 487ddcbff2122ea0731d7030a53a30e1f8253c64:
...@@ -2666,6 +2672,8 @@ runs/download-covidtracking-data.runs.ipynb: ...@@ -2666,6 +2672,8 @@ runs/download-covidtracking-data.runs.ipynb:
- .renku/workflow/bd2fe65abcff4165834b580185928246_migrated.yaml - .renku/workflow/bd2fe65abcff4165834b580185928246_migrated.yaml
4597cd96a8c52ccc007d7402321877b4e9bf9a01: 4597cd96a8c52ccc007d7402321877b4e9bf9a01:
- .renku/workflow/4cc1b9a77a354e8f8219056e84a633f2_migrated.yaml - .renku/workflow/4cc1b9a77a354e8f8219056e84a633f2_migrated.yaml
46e3de8333eb35561a51d197fc399394280641ef:
- .renku/workflow/497cd4459fde4d798e9723d84afedb4e_migrated.yaml
47453a88e9f9dbbc5275eb26e07ab9bc2977b8c3: 47453a88e9f9dbbc5275eb26e07ab9bc2977b8c3:
- .renku/workflow/db21913cec114a52ad19fab1b37aa483_migrated.yaml - .renku/workflow/db21913cec114a52ad19fab1b37aa483_migrated.yaml
48416bc931a3f0443cf2d3b159d3ff11a58723ab: 48416bc931a3f0443cf2d3b159d3ff11a58723ab:
......
This diff is collapsed.
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default: states-daily.json
streamable: false
type: string
input_2:
default: out_folder
streamable: false
type: string
input_3:
default: data/covidtracking
streamable: false
type: string
input_4:
default:
class: File
path: ../../notebooks/process/download-covidtracking-data.ipynb
streamable: false
type: File
input_5:
default: runs/download-covidtracking-data.runs.ipynb
streamable: false
type: string
input_6:
default: states-metadata.json
streamable: false
type: string
outputs:
output_2:
outputSource: step_2/output_0
streamable: false
type: File
output_3:
outputSource: step_2/output_1
streamable: false
type: Directory
requirements: []
steps:
step_1:
in:
filename: input_1
input_directory: step_2/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-daily.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- &id001
class: InlineJavascriptRequirement
- &id002
class: InitialWorkDirRequirement
listing: $(inputs.input_directory.listing)
successCodes: []
temporaryFailCodes: []
step_2:
in:
input_1: input_2
input_2: input_3
input_3: input_4
input_4: input_5
out:
- output_0
- output_1
run: a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl
step_3:
in:
filename: input_6
input_directory: step_2/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-metadata.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- *id001
- *id002
successCodes: []
temporaryFailCodes: []
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