init renku repository

.gitignore

+
+# Created by https://www.gitignore.io/api/macos,python,R,linux,vim,emacs
+
+### Emacs ###
+# -*- mode: gitignore; -*-
+*~
+\#*\#
+/.emacs.desktop
+/.emacs.desktop.lock
+*.elc
+auto-save-list
+tramp
+.\#*
+
+# Org-mode
+.org-id-locations
+*_archive
+
+# flymake-mode
+*_flymake.*
+
+# eshell files
+/eshell/history
+/eshell/lastdir
+
+# elpa packages
+/elpa/
+
+# reftex files
+*.rel
+
+# AUCTeX auto folder
+/auto/
+
+# cask packages
+.cask/
+dist/
+
+# Flycheck
+flycheck_*.el
+
+# server auth directory
+/server/
+
+# projectiles files
+.projectile
+
+# directory configuration
+.dir-locals.el
+
+### Linux ###
+
+# temporary files which can be created if a process still has a handle open of a deleted file
+.fuse_hidden*
+
+# KDE directory preferences
+.directory
+
+# Linux trash folder which might appear on any partition or disk
+.Trash-*
+
+# .nfs files are created when an open file is removed but is still being accessed
+.nfs*
+
+### macOS ###
+# General
+.DS_Store
+.AppleDouble
+.LSOverride
+
+# Icon must end with two \r
+Icon
+
+# Thumbnails
+._*
+
+# Files that might appear in the root of a volume
+.DocumentRevisions-V100
+.fseventsd
+.Spotlight-V100
+.TemporaryItems
+.Trashes
+.VolumeIcon.icns
+.com.apple.timemachine.donotpresent
+
+# Directories potentially created on remote AFP share
+.AppleDB
+.AppleDesktop
+Network Trash Folder
+Temporary Items
+.apdisk
+
+### Python ###
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+.hypothesis/
+.pytest_cache/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# pyenv
+.python-version
+
+# celery beat schedule file
+celerybeat-schedule
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+
+### Python Patch ###
+.venv/
+
+### Python.VirtualEnv Stack ###
+# Virtualenv
+# http://iamzed.com/2009/05/07/a-primer-on-virtualenv/
+[Bb]in
+[Ii]nclude
+[Ll]ib
+[Ll]ib64
+[Ll]ocal
+[Ss]cripts
+pyvenv.cfg
+pip-selfcheck.json
+
+### R ###
+# History files
+.Rhistory
+.Rapp.history
+
+# Session Data files
+.RData
+
+# Example code in package build process
+*-Ex.R
+
+# Output files from R CMD build
+/*.tar.gz
+
+# Output files from R CMD check
+/*.Rcheck/
+
+# RStudio files
+.Rproj.user/
+
+# produced vignettes
+vignettes/*.html
+vignettes/*.pdf
+
+# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
+.httr-oauth
+
+# knitr and R markdown default cache directories
+/*_cache/
+/cache/
+
+# Temporary files created by R markdown
+*.utf8.md
+*.knit.md
+
+# Shiny token, see https://shiny.rstudio.com/articles/shinyapps.html
+rsconnect/
+
+### R.Bookdown Stack ###
+# R package: bookdown caching files
+/*_files/
+
+### Vim ###
+# Swap
+[._]*.s[a-v][a-z]
+[._]*.sw[a-p]
+[._]s[a-rt-v][a-z]
+[._]ss[a-gi-z]
+[._]sw[a-p]
+
+# Session
+Session.vim
+
+# Temporary
+.netrwhist
+# Auto-generated tag files
+tags
+# Persistent undo
+[._]*.un~
+
+
+# End of https://www.gitignore.io/api/macos,python,R,linux,vim,emacs

.gitlab-ci.yml

+# renku: v1.dev20180723
+
+variables:
+  GIT_STRATEGY: fetch
+  GIT_SSL_NO_VERIFY: "true"
+  GIT_SUBMODULE_STRATEGY: recursive
+  GIT_LFS_SKIP_SMUDGE: 1
+
+stages:
+  - build
+
+image_build:
+  stage: build
+  image: docker:stable
+  before_script:
+    - docker login -u gitlab-ci-token -p $CI_JOB_TOKEN http://$CI_REGISTRY
+  script:
+    - docker pull renku/singleuser:0.2.0
+    - CI_COMMIT_SHA_7=$(echo $CI_COMMIT_SHA | cut -c1-7)
+    - docker build --tag $CI_REGISTRY_IMAGE:$CI_COMMIT_SHA_7 .
+    - docker push $CI_REGISTRY_IMAGE:$CI_COMMIT_SHA_7
+  tags:
+    - image-build
+
+dot:
+  stage: build
+  image: renku/renku-python:0.2.0
+  script:
+    - renku log --format dot $(git ls-files --no-empty-directory --recurse-submodules) > graph.dot
+  artifacts:
+    paths:
+      - graph.dot
+  environment:
+    name: dot/$CI_COMMIT_REF_NAME
+    url: $CI_PROJECT_URL/-/jobs/artifacts/$CI_COMMIT_REF_NAME/raw/graph.dot?job=$CI_JOB_NAME

.renku/metadata.yml

+'@context':
+  created: http://schema.org/dateCreated
+  foaf: http://xmlns.com/foaf/0.1/
+  name: foaf:name
+  updated: http://schema.org/dateUpdated
+  version: http://schema.org/schemaVersion
+'@type': foaf:Project
+created: 2018-11-16T14:51:48.230Z
+name: democrasci_preprocWP1
+updated: 2018-11-16T14:51:48.230Z
+version: '1'

Dockerfile

+FROM renku/singleuser:0.2.0
+
+# Uncomment and adapt if code is to be included in the image
+# COPY src /code/src
+
+# install the python dependencies
+COPY requirements.txt /tmp/requirements.txt
+RUN pip install -r /tmp/requirements.txt

README.md

+# democrasci_preprocWP1
+A Renku project.

requirements.txt

+