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Commit 5ed8aefa authored by Chandrasekhar Ramakrishnan's avatar Chandrasekhar Ramakrishnan Committed by renku 0.10.0
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renku run papermill --report-mode -p ts_folder ./data/covid-19_jhu-csse/ -p...

renku run papermill --report-mode -p ts_folder ./data/covid-19_jhu-csse/ -p rates_folder ./data/covid-19_rates/ -p geodata_path ./data/geodata/geo_data.csv --inject-paths notebooks/Dashboard.ipynb runs/Dashboard.run.ipynb
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arguments:
- position: 1
separate: true
shellQuote: true
valueFrom: --report-mode
baseCommand:
- papermill
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
input_2:
default: ts_folder
inputBinding:
position: 2
prefix: -p
separate: true
shellQuote: true
streamable: false
type: string
input_3:
default:
class: Directory
listing: []
path: ../../data/covid-19_jhu-csse
inputBinding:
position: 3
separate: true
shellQuote: true
streamable: false
type: Directory
input_4:
default: rates_folder
inputBinding:
position: 4
prefix: -p
separate: true
shellQuote: true
streamable: false
type: string
input_5:
default:
class: Directory
listing: []
path: ../../data/covid-19_rates
inputBinding:
position: 5
separate: true
shellQuote: true
streamable: false
type: Directory
input_6:
default: geodata_path
inputBinding:
position: 6
prefix: -p
separate: true
shellQuote: true
streamable: false
type: string
input_7:
default:
class: File
path: ../../data/geodata/geo_data.csv
inputBinding:
position: 7
separate: true
shellQuote: true
streamable: false
type: File
input_8:
default:
class: File
path: ../../notebooks/Dashboard.ipynb
inputBinding:
position: 8
prefix: --inject-paths
separate: true
shellQuote: true
streamable: false
type: File
input_9:
default: runs/Dashboard.run.ipynb
inputBinding:
position: 9
separate: true
shellQuote: true
streamable: false
type: string
outputs:
output_0:
outputBinding:
glob: $(inputs.input_9)
streamable: false
type: File
permanentFailCodes: []
requirements:
- class: InlineJavascriptRequirement
- class: InitialWorkDirRequirement
listing:
- entry: '$({"listing": [], "class": "Directory"})'
entryname: runs
writable: true
- entry: $(inputs.input_3)
entryname: data/covid-19_jhu-csse
writable: false
- entry: $(inputs.input_5)
entryname: data/covid-19_rates
writable: false
- entry: $(inputs.input_7)
entryname: data/geodata/geo_data.csv
writable: false
- entry: $(inputs.input_8)
entryname: notebooks/Dashboard.ipynb
writable: false
successCodes: []
temporaryFailCodes: []
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