US Census (!107) · Merge requests · COVID-19 / covid-19-public-data

Merged Chandrasekhar Ramakrishnan requested to merge census into master 4 years ago

Apr 09, 2020
- data: add US census data to the atlas · cb66131b
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  cb66131b
- renku run papermill --report-mode -p ts_folder ./data/covid-19_jhu-csse/ -p... · 6e1d9b3b
  Chandrasekhar Ramakrishnan authored 4 years ago
```
renku run papermill --report-mode -p ts_folder ./data/covid-19_jhu-csse/ -p rates_folder ./data/covid-19_rates/ -p geodata_path ./data/geodata/geo_data.csv -p atlas_path ./data/atlas/ --inject-paths notebooks/Dashboard.ipynb runs/Dashboard.run.ipynb
```
  6e1d9b3b
- fix: make the path to the atlas a papermill argument · 5ccfa488
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  5ccfa488
- fix: added a tested column to jhu conversion output · 8b55f2c8
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  8b55f2c8
- workaround: reintroduce files so renku update works · 462cb73e
  Chandrasekhar Ramakrishnan authored 4 years ago
```
Re-introduce the deleted datasets.
```
  462cb73e
- renku run papermill -p ts_folder ./data/covid-19_jhu-csse/ -p wb_path... · 2a152bf1
  Chandrasekhar Ramakrishnan authored 4 years ago
```
renku run papermill -p ts_folder ./data/covid-19_jhu-csse/ -p wb_path ./data/atlas/worldbank/SP.POP.TOTL.zip -p geodata_path ./data/geodata/geo_data.csv -p out_folder ./data/covid-19_rates/ --inject-paths notebooks/process/ToRates.ipynb runs/ToRates.run.ipynb
```
  2a152bf1
- fix: remove incorrect code introduced into the notebook · 4c6e49a5
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  4c6e49a5
- workaround: moved file back after renku run · 9405da0c
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  9405da0c
- renku run papermill -p ts_folder ./data/covid-19_jhu-csse/ -p worldmap_path... · be0cb6dc
  Chandrasekhar Ramakrishnan authored 4 years ago
```
renku run papermill -p ts_folder ./data/covid-19_jhu-csse/ -p worldmap_path ./data/atlas/worldmap/country_centroids.csv -p out_folder ./data/geodata/ --inject-paths notebooks/process/CompileGeoData.ipynb runs/CompileGeoData.run.ipynb
```
  be0cb6dc
- workaround: move file so renku stops complaining · 2c97abd6
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  2c97abd6
- chore: update notebooks to use converters · 55148465
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  55148465
- docs: add blurb about converters to the readme · 71b68e11
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  71b68e11
- chore: rename dashboard to utils · 63d8341e
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  63d8341e
- chore: clear outputs from standardize_datasets notebook · 034db046
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  034db046
- feat: use Harvard Worldmap for regions without population data from Worldbank · c90274b2
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  c90274b2
- refactor: use new path for the Harvard Worldmap dataset · 95a9c4fc
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  95a9c4fc
- feat: use converters for the dashboard and refactor · b4fdc3d7
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  b4fdc3d7
- feat: add national converter for italy · 919f575b
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  919f575b
- chore: update standardization notebook · 2b58cf0e
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  2b58cf0e
- renku run --input notebooks/process/wikidata-pop-data.ipynb papermill -p... · 6d16a55d
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
```
renku run --input notebooks/process/wikidata-pop-data.ipynb papermill -p out_folder ./data/atlas/wikidata --inject-paths notebooks/process/wikidata-pop-data.ipynb runs/wikidata-pop-data.run.ipynb
```
  6d16a55d
- chore: refactor incidence calculation and add contry labels · adfb0109
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  adfb0109
- chore: use the atlas dataset everywhere · 38926333
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  38926333
- chore: update standardization notebook and apply black · 414624b5
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  414624b5
- fix: correct error in covidtracking conversion · afcec09e
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  afcec09e
- feat: add converter for JHU/CSSE global data · 65256793
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  65256793
- refactor: initialize converters with the atlas · fccd8bbd
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  fccd8bbd
- renku run papermill -p out_folder ./data/atlas/wikidata --inject-paths... · 8877d3c1
  Chandrasekhar Ramakrishnan authored 4 years ago
```
renku run papermill -p out_folder ./data/atlas/wikidata --inject-paths notebooks/process/wikidata-pop-data.ipynb runs/wikidata-pop-data.run.ipynb
```
  8877d3c1
- feat: implement notebook for getting population data from Wikidata · 9e828e70
  Chandrasekhar Ramakrishnan authored 4 years ago
  
  9e828e70
- data: added README for atlas · 09227374
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  09227374
- renku dataset rm worldmap · 2c934439
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  2c934439
- renku dataset add atlas data/atlas/worldmap/country_centroids.csv · 127f3d52
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  127f3d52
- renku dataset: committing 1 newly added files · 2eba9aed
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  2eba9aed
- data: moved Harvard worldmap from old location to atlas dataset · cf2efdc9
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  cf2efdc9
- renku dataset rm worldbank · dfeb2bdd
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  dfeb2bdd
- renku dataset add atlas data/atlas/worldbank/ · 740104d0
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  740104d0
- renku dataset: committing 1 newly added files · 047e1289
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  047e1289
- data: moved worldbank from old location to the atlas dataset · 8edcadc3
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  8edcadc3
- renku dataset create atlas · 0d22d64c
  Chandrasekhar Ramakrishnan authored 5 years ago
  
  0d22d64c
- feat: add spain standardizer · dae10602
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  dae10602
- chore: implement read methods on converter classes · 88bf5be9
  Rok Roškar authored 4 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  88bf5be9
- feat: add converter for USA (covidtracking) · 7163637d
  Andreas Bleuler authored 5 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  7163637d
- feat: implement converters for ita and che · eddad99b
  Rok Roškar authored 5 years ago and Chandrasekhar Ramakrishnan committed 4 years ago
  
  eddad99b

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