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  • jovicic/covid-19-public-data
  • sofiane.sarni/covid-19-public-data
  • mojulian/covid-19-public-data
  • paul.ronga/covid-19-public-data
  • covid-19/covid-19-public-data
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  • dev/covid-19-public-data
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  • edana.beauvais/covid-19-public-data
  • emma.jablonski/covid-19-public-data
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  • ableuler/covid-19-public-data
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  • rok.roskar/covid-19-public-data-new-fork
  • dandrea.cordoba/covid-19-public-data
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with 1502 additions and 24 deletions
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out:
- output_0
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run: d03bdcf1bad440d7ad5010cd182358d1_papermill.cwl
step_6:
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input_2: input_40
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run: e64b3ddf5a5d4949a231ca0ba62378d8_papermill.cwl
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
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default:
class: File
path: ../../notebooks/covid-19-italy.ipynb
streamable: false
type: File
input_10:
default:
class: File
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streamable: false
type: File
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default: atlas_path
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requirements: []
steps:
step_1:
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input_2: input_2
input_3: input_3
input_4: input_4
out:
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run: 4a3366aed5154987aa505ac946f1e25a_papermill.cwl
step_2:
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input_2: input_6
input_3: input_7
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input_6: input_19
input_7: input_20
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run: edeae7a3f9bd41579941a5f9b0eaf2aa_papermill.cwl
step_4:
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input_2: input_24
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input_4: input_26
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run: 2fba4568d8784fb99872b6c8a35f66b9_papermill.cwl
step_5:
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input_10: input_30
input_2: input_31
input_3: input_32
input_4: input_33
input_5: input_34
input_6: input_35
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input_8: input_37
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run: d03bdcf1bad440d7ad5010cd182358d1_papermill.cwl
step_6:
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input_1: input_39
input_2: input_40
input_3: input_41
input_4: input_42
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out:
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run: e64b3ddf5a5d4949a231ca0ba62378d8_papermill.cwl
......@@ -9,6 +9,7 @@ For each data source, we provide a simple summary notebook with interactive
figures:
* [Summary of global data from from JHU CSSE](https://renkulab.io/projects/covid-19/covid-19-public-data/files/blob/runs/Dashboard.run.ipynb)
* [Global data from from ECDC](https://renkulab.io/projects/covid-19/covid-19-public-data/files/blob/runs/covid-19-ecdc.run.ipynb)
* [U.S. state-level data from covidtracking.com](https://renkulab.io/projects/covid-19/covid-19-public-data/files/blob/runs/covidtracking.run.ipynb)
* [U.S. county-level data from the New York Times](https://renkulab.io/projects/covid-19/covid-19-public-data/files/blob/runs/covid-19-us-nyt.run.ipynb)
* [Regional data for Italy from italian Civil Protection](https://renkulab.io/projects/covid-19/covid-19-public-data/files/blob/runs/covid-19-italy.run.ipynb)
......@@ -115,6 +116,12 @@ useful helper and plotting functions that are used in the sample notebooks.
<td><a href="https://renkulab.io/projects/covid-19/covid-19-public-data/files/blob/runs/Dashboard.run.ipynb">notebooks/Dashboard.ipynb</a></td>
</tr>
<tr>
<td><a href="https://www.ecdc.europa.eu/en/publications-data/download-todays-data-geographic-distribution-covid-19-cases-worldwide">Covid-19 data collected by the ECDC</a></td>
<td><a href="https://renkulab.io/projects/covid-19/covid-19-public-data/datasets/78a35752-cc00-443d-8ed8-e37a82599099/">covid-19-ecdc</a></td>
<td><code>data/covid-19-ecdc</code></td>
<td><a href="https://renkulab.io/projects/covid-19/covid-19-public-data/files/blob/runs/covid-19-ecdc.run.ipynb">notebooks/covid-19-ecdc.ipynb</a></td>
</tr>
<tr>
<td><a href="https://covidtracking.com/">covidtracking.com</a></td>
<td><a href="https://renkulab.io/projects/covid-19/covid-19-public-data/datasets/c8bec148-5332-4602-9dc3-e39bbe92ed67/">covidtracking</a></td>
<td><code>data/covidtracking</code></td>
......@@ -173,6 +180,12 @@ CSSE)](https://github.com/CSSEGISandData/COVID-19). The
[dashboard](covid-19-public-data/files/blob/runs/Dashboard.run.ipynb) summarizes
this data in combination with population data from the world bank.
### Covid-19 Data collected by the ECDC
A global dataset collected by a team of epidemiologists at the [European Center
for Disease Prevention and
Control](https://www.ecdc.europa.eu/en/publications-data/download-todays-data-geographic-distribution-covid-19-cases-worldwide).
### Covid tracking crowdsourcing project
[Covid tracking](https://covidtracking.com) is a crowd-sourced dataset for US
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