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Commit 12ebe2a6 authored by Rok Roškar's avatar Rok Roškar Committed by renku 0.15.1
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renku migrate: committing migrated workflow

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1 merge request!398migrate to newest version of renku
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.renku/activity_index.yaml
+ 8
− 0
View file @ 12ebe2a6
......@@ -480,6 +480,8 @@ data/covidtracking:
- .renku/workflow/4b56530f20b84557a6d69943bcdef719_migrated.yaml
d2c4c5112536f17bf1bc9dc18b330f240a7ff38b:
- .renku/workflow/8d4dbd1123e44c8e8188c8f92a16b6e3_migrated.yaml
d3388fc9c2ddf3ba2332c61387751c20bebacbfb:
- .renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml
d4aa55c20be17efef631377270cbc23943f75843:
- .renku/workflow/8c48d7a8504c40f8a3aadc8a37e5dc32_migrated.yaml
d5310154a8a1e539c8e2aa1c32a8cbb8e4064c41:
......@@ -939,6 +941,8 @@ data/covidtracking/states-daily.json:
- .renku/workflow/4b56530f20b84557a6d69943bcdef719_migrated.yaml
d2c4c5112536f17bf1bc9dc18b330f240a7ff38b:
- .renku/workflow/8d4dbd1123e44c8e8188c8f92a16b6e3_migrated.yaml
d3388fc9c2ddf3ba2332c61387751c20bebacbfb:
- .renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml
d4aa55c20be17efef631377270cbc23943f75843:
- .renku/workflow/8c48d7a8504c40f8a3aadc8a37e5dc32_migrated.yaml
d5310154a8a1e539c8e2aa1c32a8cbb8e4064c41:
......@@ -1396,6 +1400,8 @@ data/covidtracking/states-metadata.json:
- .renku/workflow/4b56530f20b84557a6d69943bcdef719_migrated.yaml
d2c4c5112536f17bf1bc9dc18b330f240a7ff38b:
- .renku/workflow/8d4dbd1123e44c8e8188c8f92a16b6e3_migrated.yaml
d3388fc9c2ddf3ba2332c61387751c20bebacbfb:
- .renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml
d4aa55c20be17efef631377270cbc23943f75843:
- .renku/workflow/8c48d7a8504c40f8a3aadc8a37e5dc32_migrated.yaml
d5310154a8a1e539c8e2aa1c32a8cbb8e4064c41:
......@@ -2826,6 +2832,8 @@ runs/download-covidtracking-data.runs.ipynb:
- .renku/workflow/4b56530f20b84557a6d69943bcdef719_migrated.yaml
d2c4c5112536f17bf1bc9dc18b330f240a7ff38b:
- .renku/workflow/8d4dbd1123e44c8e8188c8f92a16b6e3_migrated.yaml
d3388fc9c2ddf3ba2332c61387751c20bebacbfb:
- .renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml
d4aa55c20be17efef631377270cbc23943f75843:
- .renku/workflow/8c48d7a8504c40f8a3aadc8a37e5dc32_migrated.yaml
d5310154a8a1e539c8e2aa1c32a8cbb8e4064c41:
......
.renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml 0 → 100644
+ 434
− 0
View file @ 12ebe2a6
- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4
'@type':
- http://purl.org/wf4ever/wfprov#WorkflowEngine
- http://www.w3.org/ns/prov#SoftwareAgent
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': renku 0.10.4
- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1
'@type':
- http://purl.org/wf4ever/wfprov#WorkflowEngine
- http://www.w3.org/ns/prov#SoftwareAgent
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': renku 0.15.1
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb
'@type':
- http://purl.org/wf4ever/wfprov#ProcessRun
- http://purl.org/wf4ever/wfprov#WorkflowRun
- http://www.w3.org/ns/prov#Activity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#comment:
- '@value': renku rerun data/covidtracking/states-metadata.json data/covidtracking/states-daily.json
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': .renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml@d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#atLocation:
- '@value': .renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml
http://www.w3.org/ns/prov#endedAtTime:
- '@type': http://www.w3.org/2001/XMLSchema#dateTime
'@value': '2020-11-23T00:23:14+00:00'
http://www.w3.org/ns/prov#influenced: []
http://www.w3.org/ns/prov#qualifiedAssociation:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/association
http://www.w3.org/ns/prov#qualifiedUsage:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/inputs/1
http://www.w3.org/ns/prov#startedAtTime:
- '@type': http://www.w3.org/2001/XMLSchema#dateTime
'@value': '2020-11-23T00:23:14+00:00'
http://www.w3.org/ns/prov#wasAssociatedWith:
- '@id': mailto:beepbop@example.com
- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1
http://www.w3.org/ns/prov#wasInformedBy:
- '@id': https://localhost/activities/commit/3b9ad518ac2e0b0daaad621af3b37678b0c18a36
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/association
'@type':
- http://www.w3.org/ns/prov#Association
http://www.w3.org/ns/prov#agent:
- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4
http://www.w3.org/ns/prov#hadPlan:
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/inputs/1
'@type':
- http://www.w3.org/ns/prov#Usage
http://www.w3.org/ns/prov#entity:
- '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb
http://www.w3.org/ns/prov#hadRole:
- '@value': steps/step_1/inputs/3
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1
'@type':
- http://purl.org/wf4ever/wfprov#ProcessRun
- http://www.w3.org/ns/prov#Activity
http://purl.org/wf4ever/wfprov#wasPartOfWorkflowRun:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#comment:
- '@value': renku rerun data/covidtracking/states-metadata.json data/covidtracking/states-daily.json
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': .renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml@d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#atLocation:
- '@value': .renku/workflow/186a35898f57462a9f5813422548bc0d_migrated.yaml
http://www.w3.org/ns/prov#endedAtTime:
- '@type': http://www.w3.org/2001/XMLSchema#dateTime
'@value': '2020-11-23T00:23:14+00:00'
http://www.w3.org/ns/prov#influenced: []
http://www.w3.org/ns/prov#qualifiedAssociation:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/association
http://www.w3.org/ns/prov#qualifiedUsage:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/inputs/3
http://www.w3.org/ns/prov#startedAtTime:
- '@type': http://www.w3.org/2001/XMLSchema#dateTime
'@value': '2020-11-23T00:23:14+00:00'
http://www.w3.org/ns/prov#wasAssociatedWith:
- '@id': mailto:beepbop@example.com
- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1
http://www.w3.org/ns/prov#wasInformedBy:
- '@id': https://localhost/activities/commit/3b9ad518ac2e0b0daaad621af3b37678b0c18a36
https://swissdatasciencecenter.github.io/renku-ontology#hasRunParameter: []
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/association
'@type':
- http://www.w3.org/ns/prov#Association
http://www.w3.org/ns/prov#agent:
- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4
http://www.w3.org/ns/prov#hadPlan:
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/inputs/3
'@type':
- http://www.w3.org/ns/prov#Usage
http://www.w3.org/ns/prov#entity:
- '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb
http://www.w3.org/ns/prov#hadRole:
- '@value': inputs/3
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/outputs/2
'@type':
- http://www.w3.org/ns/prov#Generation
http://www.w3.org/ns/prov#activity:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#hadRole:
- '@value': outputs/2
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/outputs/4
'@type':
- http://www.w3.org/ns/prov#Generation
http://www.w3.org/ns/prov#activity:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#hadRole:
- '@value': outputs/4
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/tree/data/covidtracking/states-daily.json
'@type':
- http://www.w3.org/ns/prov#Generation
http://www.w3.org/ns/prov#activity:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/tree/data/covidtracking/states-metadata.json
'@type':
- http://www.w3.org/ns/prov#Generation
http://www.w3.org/ns/prov#activity:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Collection
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': data/covidtracking@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658
http://www.w3.org/ns/prov#atLocation:
- '@value': data/covidtracking
http://www.w3.org/ns/prov#hadMember:
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-daily.json
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-metadata.json
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-daily.json
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': data/covidtracking/states-daily.json@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658
http://www.w3.org/ns/prov#atLocation:
- '@value': data/covidtracking/states-daily.json
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-metadata.json
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': data/covidtracking/states-metadata.json@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658
http://www.w3.org/ns/prov#atLocation:
- '@value': data/covidtracking/states-metadata.json
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/runs/download-covidtracking-data.runs.ipynb
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': runs/download-covidtracking-data.runs.ipynb@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658
http://www.w3.org/ns/prov#atLocation:
- '@value': runs/download-covidtracking-data.runs.ipynb
- '@id': https://renkulab.io/blob/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/data/covidtracking
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Collection
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': data/covidtracking@d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#atLocation:
- '@value': data/covidtracking
http://www.w3.org/ns/prov#hadMember:
- '@id': https://renkulab.io/blob/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/data/covidtracking/states-daily.json
- '@id': https://renkulab.io/blob/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/data/covidtracking/states-metadata.json
http://www.w3.org/ns/prov#qualifiedGeneration:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/outputs/2
- '@id': https://renkulab.io/blob/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/data/covidtracking/states-daily.json
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': data/covidtracking/states-daily.json@d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#atLocation:
- '@value': data/covidtracking/states-daily.json
http://www.w3.org/ns/prov#qualifiedGeneration:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/tree/data/covidtracking/states-daily.json
- '@id': https://renkulab.io/blob/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/data/covidtracking/states-metadata.json
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': data/covidtracking/states-metadata.json@d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#atLocation:
- '@value': data/covidtracking/states-metadata.json
http://www.w3.org/ns/prov#qualifiedGeneration:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/tree/data/covidtracking/states-metadata.json
- '@id': https://renkulab.io/blob/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/runs/download-covidtracking-data.runs.ipynb
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': runs/download-covidtracking-data.runs.ipynb@d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#atLocation:
- '@value': runs/download-covidtracking-data.runs.ipynb
http://www.w3.org/ns/prov#qualifiedGeneration:
- '@id': https://localhost/activities/commit/d3388fc9c2ddf3ba2332c61387751c20bebacbfb/steps/step_1/outputs/4
- '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb
'@type':
- http://purl.org/wf4ever/wfprov#Artifact
- http://www.w3.org/ns/prov#Entity
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': notebooks/process/download-covidtracking-data.ipynb@d754df040a4bf8f7cb7ae6ed4151830f9bb0f520
http://www.w3.org/ns/prov#atLocation:
- '@value': notebooks/process/download-covidtracking-data.ipynb
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
'@type':
- http://schema.org/Project
- http://www.w3.org/ns/prov#Location
http://schema.org/agent:
- '@value': pre-0.11.0
http://schema.org/creator:
- '@id': mailto:cramakri@ethz.ch
http://schema.org/dateCreated:
- '@value': '2020-03-11T21:43:12.736000+00:00'
http://schema.org/name:
- '@value': covid-19-dashboard
http://schema.org/schemaVersion:
- '@value': '4'
https://swissdatasciencecenter.github.io/renku-ontology#automatedTemplateUpdate:
- '@value': false
https://swissdatasciencecenter.github.io/renku-ontology#immutableTemplateFiles: []
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9
'@type':
- http://www.w3.org/ns/prov#Entity
- http://www.w3.org/ns/prov#Plan
- https://swissdatasciencecenter.github.io/renku-ontology#Run
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://schema.org/keywords: []
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': .renku/workflow/a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658
http://www.w3.org/ns/prov#atLocation:
- '@value': .renku/workflow/a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl
https://swissdatasciencecenter.github.io/renku-ontology#command:
- '@value': papermill
https://swissdatasciencecenter.github.io/renku-ontology#hasArguments:
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9/arguments/1
https://swissdatasciencecenter.github.io/renku-ontology#hasInputs:
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9/inputs/3
https://swissdatasciencecenter.github.io/renku-ontology#hasOutputs:
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9/outputs/4
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9/outputs/2
https://swissdatasciencecenter.github.io/renku-ontology#hasRunParameters: []
https://swissdatasciencecenter.github.io/renku-ontology#hasSubprocess: []
https://swissdatasciencecenter.github.io/renku-ontology#successCodes: []
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9/arguments/1
'@type':
- https://swissdatasciencecenter.github.io/renku-ontology#CommandArgument
- https://swissdatasciencecenter.github.io/renku-ontology#CommandParameter
http://schema.org/defaultValue:
- '@value': out_folder
http://schema.org/name:
- '@value': p-1
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': Command Argument "None"
https://swissdatasciencecenter.github.io/renku-ontology#position:
- '@value': 1
https://swissdatasciencecenter.github.io/renku-ontology#prefix:
- '@value': '-p '
https://swissdatasciencecenter.github.io/renku-ontology#value:
- '@value': out_folder
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9/inputs/3
'@type':
- https://swissdatasciencecenter.github.io/renku-ontology#CommandInput
- https://swissdatasciencecenter.github.io/renku-ontology#CommandParameter
http://schema.org/defaultValue:
- '@value': notebooks/process/download-covidtracking-data.ipynb
http://schema.org/name:
- '@value': inject-paths-3
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': Command Input "None"
https://swissdatasciencecenter.github.io/renku-ontology#consumes:
- '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb
https://swissdatasciencecenter.github.io/renku-ontology#position:
- '@value': 3
https://swissdatasciencecenter.github.io/renku-ontology#prefix:
- '@value': '--inject-paths '
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9/outputs/2
'@type':
- https://swissdatasciencecenter.github.io/renku-ontology#CommandOutput
- https://swissdatasciencecenter.github.io/renku-ontology#CommandParameter
http://schema.org/defaultValue:
- '@value': data/covidtracking
http://schema.org/name:
- '@value': output-2
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': Command Output "None"
https://swissdatasciencecenter.github.io/renku-ontology#createFolder:
- '@value': true
https://swissdatasciencecenter.github.io/renku-ontology#position:
- '@value': 2
https://swissdatasciencecenter.github.io/renku-ontology#produces:
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9/outputs/4
'@type':
- https://swissdatasciencecenter.github.io/renku-ontology#CommandOutput
- https://swissdatasciencecenter.github.io/renku-ontology#CommandParameter
http://schema.org/defaultValue:
- '@value': runs/download-covidtracking-data.runs.ipynb
http://schema.org/name:
- '@value': output-4
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': Command Output "None"
https://swissdatasciencecenter.github.io/renku-ontology#createFolder:
- '@value': true
https://swissdatasciencecenter.github.io/renku-ontology#position:
- '@value': 4
https://swissdatasciencecenter.github.io/renku-ontology#produces:
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/runs/download-covidtracking-data.runs.ipynb
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5
'@type':
- http://www.w3.org/ns/prov#Entity
- http://www.w3.org/ns/prov#Plan
- https://swissdatasciencecenter.github.io/renku-ontology#Run
http://schema.org/isPartOf:
- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data
http://schema.org/keywords: []
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': .renku/workflow/cc9fab4f0fd64be18d5cebd55a394e92.cwl@d3388fc9c2ddf3ba2332c61387751c20bebacbfb
http://www.w3.org/ns/prov#atLocation:
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https://swissdatasciencecenter.github.io/renku-ontology#hasArguments: []
https://swissdatasciencecenter.github.io/renku-ontology#hasInputs:
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5/steps/step_1/inputs/3
https://swissdatasciencecenter.github.io/renku-ontology#hasOutputs:
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5/steps/step_1/outputs/4
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5/steps/step_1/outputs/2
https://swissdatasciencecenter.github.io/renku-ontology#hasRunParameters: []
https://swissdatasciencecenter.github.io/renku-ontology#hasSubprocess:
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https://swissdatasciencecenter.github.io/renku-ontology#successCodes: []
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5/steps/step_1/inputs/3
'@type':
- https://swissdatasciencecenter.github.io/renku-ontology#CommandInput
- https://swissdatasciencecenter.github.io/renku-ontology#CommandParameter
http://schema.org/defaultValue:
- '@value': notebooks/process/download-covidtracking-data.ipynb
http://schema.org/name:
- '@value': inject-paths-3
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': Command Input "None"
https://swissdatasciencecenter.github.io/renku-ontology#consumes:
- '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb
https://swissdatasciencecenter.github.io/renku-ontology#position:
- '@value': 3
https://swissdatasciencecenter.github.io/renku-ontology#prefix:
- '@value': '--inject-paths '
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5/steps/step_1/outputs/2
'@type':
- https://swissdatasciencecenter.github.io/renku-ontology#CommandOutput
- https://swissdatasciencecenter.github.io/renku-ontology#CommandParameter
http://schema.org/defaultValue:
- '@value': data/covidtracking
http://schema.org/name:
- '@value': output-2
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': Command Output "None"
https://swissdatasciencecenter.github.io/renku-ontology#createFolder:
- '@value': true
https://swissdatasciencecenter.github.io/renku-ontology#position:
- '@value': 2
https://swissdatasciencecenter.github.io/renku-ontology#produces:
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5/steps/step_1/outputs/4
'@type':
- https://swissdatasciencecenter.github.io/renku-ontology#CommandOutput
- https://swissdatasciencecenter.github.io/renku-ontology#CommandParameter
http://schema.org/defaultValue:
- '@value': runs/download-covidtracking-data.runs.ipynb
http://schema.org/name:
- '@value': output-4
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': Command Output "None"
https://swissdatasciencecenter.github.io/renku-ontology#createFolder:
- '@value': true
https://swissdatasciencecenter.github.io/renku-ontology#position:
- '@value': 4
https://swissdatasciencecenter.github.io/renku-ontology#produces:
- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/runs/download-covidtracking-data.runs.ipynb
- '@id': https://renkulab.io/runs/55b7772c8822d7bdd51e71426e3ecda94d7690f5/subprocess/1
'@type':
- https://swissdatasciencecenter.github.io/renku-ontology#OrderedSubprocess
https://swissdatasciencecenter.github.io/renku-ontology#index:
- '@value': 1
https://swissdatasciencecenter.github.io/renku-ontology#process:
- '@id': https://renkulab.io/runs/021e81822ad6b3cc84cb7621e51cb8ac9091afc9
- '@id': mailto:beepbop@example.com
'@type':
- http://schema.org/Person
- http://www.w3.org/ns/prov#Person
http://schema.org/email:
- '@value': beepbop@example.com
http://schema.org/name:
- '@value': CR (covid cron)
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': CR (covid cron)
- '@id': mailto:cramakri@ethz.ch
'@type':
- http://schema.org/Person
- http://www.w3.org/ns/prov#Person
http://schema.org/email:
- '@value': cramakri@ethz.ch
http://schema.org/name:
- '@value': Chandrasekhar Ramakrishnan
http://www.w3.org/2000/01/rdf-schema#label:
- '@value': Chandrasekhar Ramakrishnan
.renku/workflow/cc9fab4f0fd64be18d5cebd55a394e92.cwl deleted 100644 → 0
+ 0
− 120
View file @ 2d4d8cb7
class: Workflow
cwlVersion: v1.0
hints: []
inputs:
input_1:
default: states-metadata.json
streamable: false
type: string
input_2:
default: out_folder
streamable: false
type: string
input_3:
default: data/covidtracking
streamable: false
type: string
input_4:
default:
class: File
path: ../../notebooks/process/download-covidtracking-data.ipynb
streamable: false
type: File
input_5:
default: runs/download-covidtracking-data.runs.ipynb
streamable: false
type: string
input_6:
default: states-daily.json
streamable: false
type: string
outputs:
output_0:
outputSource: step_2/output_1
streamable: false
type: Directory
output_2:
outputSource: step_2/output_0
streamable: false
type: File
requirements: []
steps:
step_1:
in:
filename: input_1
input_directory: step_2/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-metadata.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- &id001
class: InlineJavascriptRequirement
- &id002
class: InitialWorkDirRequirement
listing: $(inputs.input_directory.listing)
successCodes: []
temporaryFailCodes: []
step_2:
in:
input_1: input_2
input_2: input_3
input_3: input_4
input_4: input_5
out:
- output_0
- output_1
run: a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl
step_3:
in:
filename: input_6
input_directory: step_2/output_1
out:
- output_file
run:
arguments: []
baseCommand:
- 'true'
class: CommandLineTool
cwlVersion: v1.0
hints: []
inputs:
filename:
default: states-daily.json
streamable: false
type: string
input_directory:
streamable: false
type: Directory
outputs:
output_file:
outputBinding:
glob: $(inputs.filename)
streamable: false
type: File
permanentFailCodes: []
requirements:
- *id001
- *id002
successCodes: []
temporaryFailCodes: []
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