From f3783abe6278f8bc88d9a5ea9f8b8f9158f85e68 Mon Sep 17 00:00:00 2001
From: Lili Gasser <gasserli@ethz.ch>
Date: Mon, 21 Jan 2019 10:33:39 +0000
Subject: [PATCH] renku run python src/python/run_correct_meta.py
data/AB//1930/01_rawmeta.tar.gz data/AB//1930/03_correctedmeta.tar.gz
---
.gitattributes | 1 +
...67b41c0062a4186add56b3ee654612a_python.cwl | 51 +++++++++++++++++++
data/AB/1930/03_correctedmeta.tar.gz | 3 ++
3 files changed, 55 insertions(+)
create mode 100644 .renku/workflow/a67b41c0062a4186add56b3ee654612a_python.cwl
create mode 100644 data/AB/1930/03_correctedmeta.tar.gz
diff --git a/.gitattributes b/.gitattributes
index ed5c289c..7766101b 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -173,3 +173,4 @@ data/AB/1926/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1927/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1928/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1929/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
+data/AB/1930/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
diff --git a/.renku/workflow/a67b41c0062a4186add56b3ee654612a_python.cwl b/.renku/workflow/a67b41c0062a4186add56b3ee654612a_python.cwl
new file mode 100644
index 00000000..4f69fad7
--- /dev/null
+++ b/.renku/workflow/a67b41c0062a4186add56b3ee654612a_python.cwl
@@ -0,0 +1,51 @@
+arguments: []
+baseCommand:
+- python
+class: CommandLineTool
+cwlVersion: v1.0
+hints: []
+inputs:
+ input_1:
+ default:
+ class: File
+ path: ../../src/python/run_correct_meta.py
+ inputBinding:
+ position: 1
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: File
+ input_2:
+ default:
+ class: File
+ path: ../../data/AB/1930/01_rawmeta.tar.gz
+ inputBinding:
+ position: 2
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: File
+ input_3:
+ default: data/AB/1930/03_correctedmeta.tar.gz
+ inputBinding:
+ position: 3
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: string
+outputs:
+ output_0:
+ outputBinding:
+ glob: $(inputs.input_3)
+ streamable: false
+ type: File
+permanentFailCodes: []
+requirements:
+- class: InlineJavascriptRequirement
+- class: InitialWorkDirRequirement
+ listing:
+ - entry: '$({"listing": [], "class": "Directory"})'
+ entryname: data/AB/1930
+ writable: true
+successCodes: []
+temporaryFailCodes: []
diff --git a/data/AB/1930/03_correctedmeta.tar.gz b/data/AB/1930/03_correctedmeta.tar.gz
new file mode 100644
index 00000000..aad6696e
--- /dev/null
+++ b/data/AB/1930/03_correctedmeta.tar.gz
@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:c3701a25fa147ed940e674ee6bf8983f441cb6096eec12193b5ef5eea0b249f8
+size 348160
--
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