diff --git a/.gitattributes b/.gitattributes index 910684a0f9b364d581cca6d9fd4e3fe58dc783db..9fd30c89f0cd47f692d39b81672fe448a894f541 100644 --- a/.gitattributes +++ b/.gitattributes @@ -394,3 +394,4 @@ data/AB/1917/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1918/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1919/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1920/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text +data/AB/1921/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/8194b817dbfb45ce97f0a22033e1a58c_python.cwl b/.renku/workflow/8194b817dbfb45ce97f0a22033e1a58c_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..e49055262d5d0f32b6034d53fa8981ad25592557 --- /dev/null +++ b/.renku/workflow/8194b817dbfb45ce97f0a22033e1a58c_python.cwl @@ -0,0 +1,61 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_collect_information.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1921/05_annotatedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: + class: File + path: ../../data/AB/1921/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: File + input_4: + default: data/AB/1921/06_collectedinformation.pickle + inputBinding: + position: 4 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_4) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1921 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1921/06_collectedinformation.pickle b/data/AB/1921/06_collectedinformation.pickle new file mode 100644 index 0000000000000000000000000000000000000000..3b634cda43e2940d494abe880978362241a24d85 --- /dev/null +++ b/data/AB/1921/06_collectedinformation.pickle @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f6dc87e4ae36483b9ddad9f4d20fc3ed3721996d70c95eb046bf25c374b1ed3d +size 8909948