From 747457411f1ab8edeb21d7c1ce82417ed08e5301 Mon Sep 17 00:00:00 2001 From: Luis Salamanca <luis.salamanca@sdsc.ethz.ch> Date: Fri, 7 Dec 2018 20:35:59 +0000 Subject: [PATCH] renku run python src/python/run_correctxml.py data/AB//1916/02_extractedxml.tar.gz data/AB//1916/04_correctedxml.tar.gz --- ...b9a58755c124938820e233de053c576_python.cwl | 51 +++++++++++++++++++ data/AB/1916/04_correctedxml.tar.gz | 4 +- 2 files changed, 53 insertions(+), 2 deletions(-) create mode 100644 .renku/workflow/0b9a58755c124938820e233de053c576_python.cwl diff --git a/.renku/workflow/0b9a58755c124938820e233de053c576_python.cwl b/.renku/workflow/0b9a58755c124938820e233de053c576_python.cwl new file mode 100644 index 00000000..f4319640 --- /dev/null +++ b/.renku/workflow/0b9a58755c124938820e233de053c576_python.cwl @@ -0,0 +1,51 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_correctxml.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1916/02_extractedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: data/AB/1916/04_correctedxml.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_3) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1916 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1916/04_correctedxml.tar.gz b/data/AB/1916/04_correctedxml.tar.gz index 04971e80..fcc35590 100644 --- a/data/AB/1916/04_correctedxml.tar.gz +++ b/data/AB/1916/04_correctedxml.tar.gz @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:3e43a4c15818d5b5423109559179efd0f1490ada61c30e9b6238a80007386da2 -size 3304640 +oid sha256:d69ac9fe06be9333d731efcd9db883c8d001c6e3510025b508608ae19485708a +size 3303068 -- GitLab