diff --git a/.gitattributes b/.gitattributes index 7f215f2a6d4eaaae6f38364bd4927946913c54ba..ec48abaa8b941867c0b35893b16a0a20a3275ae5 100644 --- a/.gitattributes +++ b/.gitattributes @@ -387,3 +387,4 @@ data/AB/1910/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1911/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1912/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1913/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text +data/AB/1914/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/f7024fd533c0439881b50e7368ddb8e9_python.cwl b/.renku/workflow/f7024fd533c0439881b50e7368ddb8e9_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..6e615277e2164ebb0fccf1093b4481c4cb6bad9a --- /dev/null +++ b/.renku/workflow/f7024fd533c0439881b50e7368ddb8e9_python.cwl @@ -0,0 +1,61 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_collect_information.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1914/05_annotatedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: + class: File + path: ../../data/AB/1914/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: File + input_4: + default: data/AB/1914/06_collectedinformation.pickle + inputBinding: + position: 4 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_4) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1914 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1914/06_collectedinformation.pickle b/data/AB/1914/06_collectedinformation.pickle new file mode 100644 index 0000000000000000000000000000000000000000..c733b5dda35fddee2421958fe1ad28b58100f0dc --- /dev/null +++ b/data/AB/1914/06_collectedinformation.pickle @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a03ba42e37fb950c536e79751d58535fe395ab4261bbcecf05e537eb826b9dd2 +size 4562221