diff --git a/.gitattributes b/.gitattributes index 992c8a2d2d973c255d950590c96f972708da4995..99fdb6d31e6cd85af35ddd6416c2a920d5468661 100644 --- a/.gitattributes +++ b/.gitattributes @@ -406,3 +406,4 @@ data/AB/1929/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1930/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1931/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1932/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text +data/AB/1933/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/bc04bb5c6e8e4741806247fe2f605562_python.cwl b/.renku/workflow/bc04bb5c6e8e4741806247fe2f605562_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..cf8b6a978d365b4e1b1fc1d512e75d1f08b5fadf --- /dev/null +++ b/.renku/workflow/bc04bb5c6e8e4741806247fe2f605562_python.cwl @@ -0,0 +1,61 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_collect_information.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1933/05_annotatedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: + class: File + path: ../../data/AB/1933/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: File + input_4: + default: data/AB/1933/06_collectedinformation.pickle + inputBinding: + position: 4 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_4) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1933 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1933/06_collectedinformation.pickle b/data/AB/1933/06_collectedinformation.pickle new file mode 100644 index 0000000000000000000000000000000000000000..02eae266a63c4836becbc5bf84df422cdebd837d --- /dev/null +++ b/data/AB/1933/06_collectedinformation.pickle @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:fe2145b7337bef07d39eda12bee0f7eecd6b71a2445a5603e2465442aa524119 +size 10333853