From 59747b667d3b9d317a2308fccd6430cfc4eb60a4 Mon Sep 17 00:00:00 2001
From: Luis Salamanca <luis.salamanca@sdsc.ethz.ch>
Date: Fri, 30 Nov 2018 22:07:04 +0000
Subject: [PATCH] renku run python src/python/run_extract_origxml.py
data/AB//1916/00_rawpdfs.tar.gz data/AB//1916/02_extractedxml.tar.gz
---
.gitattributes | 1 +
...b606b992b0d41e9b626bc38519393fc_python.cwl | 51 +++++++++++++++++++
data/AB/1916/02_extractedxml.tar.gz | 3 ++
3 files changed, 55 insertions(+)
create mode 100644 .renku/workflow/0b606b992b0d41e9b626bc38519393fc_python.cwl
create mode 100644 data/AB/1916/02_extractedxml.tar.gz
diff --git a/.gitattributes b/.gitattributes
index 3504f9a1..a8133aca 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -27,3 +27,4 @@ data/AB/1912/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1913/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1914/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1915/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text
+data/AB/1916/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text
diff --git a/.renku/workflow/0b606b992b0d41e9b626bc38519393fc_python.cwl b/.renku/workflow/0b606b992b0d41e9b626bc38519393fc_python.cwl
new file mode 100644
index 00000000..d0413aa4
--- /dev/null
+++ b/.renku/workflow/0b606b992b0d41e9b626bc38519393fc_python.cwl
@@ -0,0 +1,51 @@
+arguments: []
+baseCommand:
+- python
+class: CommandLineTool
+cwlVersion: v1.0
+hints: []
+inputs:
+ input_1:
+ default:
+ class: File
+ path: ../../src/python/run_extract_origxml.py
+ inputBinding:
+ position: 1
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: File
+ input_2:
+ default:
+ class: File
+ path: ../../data/AB/1916/00_rawpdfs.tar.gz
+ inputBinding:
+ position: 2
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: File
+ input_3:
+ default: data/AB/1916/02_extractedxml.tar.gz
+ inputBinding:
+ position: 3
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: string
+outputs:
+ output_0:
+ outputBinding:
+ glob: $(inputs.input_3)
+ streamable: false
+ type: File
+permanentFailCodes: []
+requirements:
+- class: InlineJavascriptRequirement
+- class: InitialWorkDirRequirement
+ listing:
+ - entry: '$({"listing": [], "class": "Directory"})'
+ entryname: data/AB/1916
+ writable: true
+successCodes: []
+temporaryFailCodes: []
diff --git a/data/AB/1916/02_extractedxml.tar.gz b/data/AB/1916/02_extractedxml.tar.gz
new file mode 100644
index 00000000..7e3a4db5
--- /dev/null
+++ b/data/AB/1916/02_extractedxml.tar.gz
@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:3e433375080decdd5ab5b29e2cc90c86c831f9cc4baee1cea0df3e423264d7bf
+size 43422615
--
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