diff --git a/.gitattributes b/.gitattributes index 34af8787b8c444557d200685b39c7ac6d3c80b6c..21fef75fe7e82062beb28ff53687073143954c16 100644 --- a/.gitattributes +++ b/.gitattributes @@ -379,3 +379,4 @@ data/AB/1902/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1903/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1904/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1905/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text +data/AB/1906/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/39ac03bf7ae84b7daacf00dfc104a91f_python.cwl b/.renku/workflow/39ac03bf7ae84b7daacf00dfc104a91f_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..619f6bec33315750ce9605e9cdf8b86b895670ea --- /dev/null +++ b/.renku/workflow/39ac03bf7ae84b7daacf00dfc104a91f_python.cwl @@ -0,0 +1,61 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_collect_information.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1906/05_annotatedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: + class: File + path: ../../data/AB/1906/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: File + input_4: + default: data/AB/1906/06_collectedinformation.pickle + inputBinding: + position: 4 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_4) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1906 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1906/06_collectedinformation.pickle b/data/AB/1906/06_collectedinformation.pickle new file mode 100644 index 0000000000000000000000000000000000000000..ea0769f16b51541b0d05023d13ccb9752119cd7b --- /dev/null +++ b/data/AB/1906/06_collectedinformation.pickle @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6a77f3001704edba18e696b89118aa092eb828876c1e88790eaf1001a5472b78 +size 7950271