diff --git a/.gitattributes b/.gitattributes index cf7718a5166b4df979356f6a7075ca9e41832bcf..e8caddb3d2e4fcacfe8734c6b5328f622d9eb63b 100644 --- a/.gitattributes +++ b/.gitattributes @@ -390,3 +390,4 @@ data/AB/1913/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1914/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1915/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1916/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text +data/AB/1917/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/df40e3a2116343fbbf5e3afe5a75437e_python.cwl b/.renku/workflow/df40e3a2116343fbbf5e3afe5a75437e_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..43a01dcdf4a2edcbb8777707f22b8ce86193aad4 --- /dev/null +++ b/.renku/workflow/df40e3a2116343fbbf5e3afe5a75437e_python.cwl @@ -0,0 +1,61 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_collect_information.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1917/05_annotatedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: + class: File + path: ../../data/AB/1917/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: File + input_4: + default: data/AB/1917/06_collectedinformation.pickle + inputBinding: + position: 4 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_4) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1917 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1917/06_collectedinformation.pickle b/data/AB/1917/06_collectedinformation.pickle new file mode 100644 index 0000000000000000000000000000000000000000..44423728692e8761777c3076f6e6bb02ee7080cb --- /dev/null +++ b/data/AB/1917/06_collectedinformation.pickle @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:dafd03c53870b3f1a09aed164a2eecf8e3bf32e0d15ff6baf653c2f1993e17c0 +size 4917173