From 5371cc48b8888fc857d77542cce00402db1fa3f0 Mon Sep 17 00:00:00 2001
From: Lilian Gasser <gasserli@ethz.ch>
Date: Tue, 5 Feb 2019 20:01:52 +0100
Subject: [PATCH] renku run python src/python/extract_document_titles.py
data/AB/ 03_correctedmeta data/lists/all_titles.csv
---
.gitattributes | 1 +
...7f5834807064a1f8ed8026be247a3be_python.cwl | 60 +++++++++++++++++++
data/lists/all_titles.csv | 3 +
3 files changed, 64 insertions(+)
create mode 100644 .renku/workflow/d7f5834807064a1f8ed8026be247a3be_python.cwl
create mode 100644 data/lists/all_titles.csv
diff --git a/.gitattributes b/.gitattributes
index 239462ba..25caffd4 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -254,3 +254,4 @@ data/AB/1983/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1991/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1991/04_correctedxml.tar.gz filter=lfs diff=lfs merge=lfs -text
data/lists/dict_overlaps.pickle filter=lfs diff=lfs merge=lfs -text
+data/lists/all_titles.csv filter=lfs diff=lfs merge=lfs -text
diff --git a/.renku/workflow/d7f5834807064a1f8ed8026be247a3be_python.cwl b/.renku/workflow/d7f5834807064a1f8ed8026be247a3be_python.cwl
new file mode 100644
index 00000000..1226793d
--- /dev/null
+++ b/.renku/workflow/d7f5834807064a1f8ed8026be247a3be_python.cwl
@@ -0,0 +1,60 @@
+arguments: []
+baseCommand:
+- python
+class: CommandLineTool
+cwlVersion: v1.0
+hints: []
+inputs:
+ input_1:
+ default:
+ class: File
+ path: ../../src/python/extract_document_titles.py
+ inputBinding:
+ position: 1
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: File
+ input_2:
+ default:
+ class: Directory
+ listing: []
+ path: ../../data/AB
+ inputBinding:
+ position: 2
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: Directory
+ input_3:
+ default: 03_correctedmeta
+ inputBinding:
+ position: 3
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: string
+ input_4:
+ default: data/lists/all_titles.csv
+ inputBinding:
+ position: 4
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: string
+outputs:
+ output_0:
+ outputBinding:
+ glob: $(inputs.input_4)
+ streamable: false
+ type: File
+permanentFailCodes: []
+requirements:
+- class: InlineJavascriptRequirement
+- class: InitialWorkDirRequirement
+ listing:
+ - entry: '$({"listing": [], "class": "Directory"})'
+ entryname: data/lists
+ writable: true
+successCodes: []
+temporaryFailCodes: []
diff --git a/data/lists/all_titles.csv b/data/lists/all_titles.csv
new file mode 100644
index 00000000..812c19fa
--- /dev/null
+++ b/data/lists/all_titles.csv
@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:45fbfbadcb22dcb849344764815b91ba6a54e092f392f5ea6b84d04d8e90c9cd
+size 5867681
--
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