diff --git a/.gitattributes b/.gitattributes index 4dacf36bb80a36b5fdaa58618cf36b01cfdfe32a..e6306ca65cc0746384b7c5a063b8a29c7afc1862 100644 --- a/.gitattributes +++ b/.gitattributes @@ -400,3 +400,4 @@ data/AB/1923/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1924/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1925/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1926/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text +data/AB/1927/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/2b178a823b4c48e6bd4360450dfb292a_python.cwl b/.renku/workflow/2b178a823b4c48e6bd4360450dfb292a_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..cd37a7364143ae8c8d1f41aff916117f0db895a2 --- /dev/null +++ b/.renku/workflow/2b178a823b4c48e6bd4360450dfb292a_python.cwl @@ -0,0 +1,61 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_collect_information.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1927/05_annotatedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: + class: File + path: ../../data/AB/1927/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: File + input_4: + default: data/AB/1927/06_collectedinformation.pickle + inputBinding: + position: 4 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_4) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1927 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1927/06_collectedinformation.pickle b/data/AB/1927/06_collectedinformation.pickle new file mode 100644 index 0000000000000000000000000000000000000000..367daa362e36a3eff1334f4bcda934bfc594c2fc --- /dev/null +++ b/data/AB/1927/06_collectedinformation.pickle @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6ef206ac60d4b2a4bfc22a2d5aca5b483422b5a382d1758eeedb295c97666f2d +size 9196202