diff --git a/.gitattributes b/.gitattributes index 5edf2d82c7ab12459d6ce7cfea50ec2ff22215fc..00e9987641b2966f9747a7fb9e95b732051ca766 100644 --- a/.gitattributes +++ b/.gitattributes @@ -385,3 +385,4 @@ data/AB/1908/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1909/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1910/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text data/AB/1911/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text +data/AB/1912/06_collectedinformation.pickle filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/1c76cf8d425b4cde8d57d73da520d63b_python.cwl b/.renku/workflow/1c76cf8d425b4cde8d57d73da520d63b_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..ae7b7308289fcdbd599cf70687b82fb5035403e7 --- /dev/null +++ b/.renku/workflow/1c76cf8d425b4cde8d57d73da520d63b_python.cwl @@ -0,0 +1,61 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_collect_information.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1912/05_annotatedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: + class: File + path: ../../data/AB/1912/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: File + input_4: + default: data/AB/1912/06_collectedinformation.pickle + inputBinding: + position: 4 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_4) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1912 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1912/06_collectedinformation.pickle b/data/AB/1912/06_collectedinformation.pickle new file mode 100644 index 0000000000000000000000000000000000000000..2cd4d53e7ef09db8498362cbcf1272e64aadb97b --- /dev/null +++ b/data/AB/1912/06_collectedinformation.pickle @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:90f34283fa65ac878ff96687fb1f00ce29c29f0c6c6809484ea24cca93a41300 +size 3168526