From 2b97c0f88b8587b416b0b0e5141e2f5cfdf6e791 Mon Sep 17 00:00:00 2001 From: Luis Salamanca <luis.salamanca@sdsc.ethz.ch> Date: Wed, 30 Jan 2019 09:48:51 +0000 Subject: [PATCH] renku run python src/python/run_correctxml.py data/AB//1991/02_extractedxml.tar.gz data/AB//1991/04_correctedxml.tar.gz --- .gitattributes | 1 + ...529202c4bba462f8b66a848b64eb10f_python.cwl | 51 +++++++++++++++++++ data/AB/1991/04_correctedxml.tar.gz | 3 ++ 3 files changed, 55 insertions(+) create mode 100644 .renku/workflow/a529202c4bba462f8b66a848b64eb10f_python.cwl create mode 100644 data/AB/1991/04_correctedxml.tar.gz diff --git a/.gitattributes b/.gitattributes index 9478b602..c0a664b9 100644 --- a/.gitattributes +++ b/.gitattributes @@ -250,3 +250,4 @@ data/AB/1977/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1982/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1983/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1991/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text +data/AB/1991/04_correctedxml.tar.gz filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/a529202c4bba462f8b66a848b64eb10f_python.cwl b/.renku/workflow/a529202c4bba462f8b66a848b64eb10f_python.cwl new file mode 100644 index 00000000..ff090ca3 --- /dev/null +++ b/.renku/workflow/a529202c4bba462f8b66a848b64eb10f_python.cwl @@ -0,0 +1,51 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_correctxml.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1991/02_extractedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: data/AB/1991/04_correctedxml.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_3) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1991 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1991/04_correctedxml.tar.gz b/data/AB/1991/04_correctedxml.tar.gz new file mode 100644 index 00000000..3c2b7184 --- /dev/null +++ b/data/AB/1991/04_correctedxml.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ed1bd53b584fca43253e09d30f9763daaa17ca599f200cc61b88608163c56a19 +size 29447328 -- GitLab