From 243b378f266341ffa0dce6fe919bb957204ba866 Mon Sep 17 00:00:00 2001 From: Luis Salamanca <luis.salamanca@sdsc.ethz.ch> Date: Sat, 29 Dec 2018 02:19:10 +0000 Subject: [PATCH] renku run python src/python/run_extract_origxml.py data/AB//1964/00_rawpdfs.tar.gz data/AB//1964/02_extractedxml.tar.gz --- .gitattributes | 1 + ...247698ec80e42bea4f8843c9441d924_python.cwl | 51 +++++++++++++++++++ data/AB/1964/02_extractedxml.tar.gz | 3 ++ 3 files changed, 55 insertions(+) create mode 100644 .renku/workflow/3247698ec80e42bea4f8843c9441d924_python.cwl create mode 100644 data/AB/1964/02_extractedxml.tar.gz diff --git a/.gitattributes b/.gitattributes index f7107cf4..d1a64ff6 100644 --- a/.gitattributes +++ b/.gitattributes @@ -127,3 +127,4 @@ data/AB/1960/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1961/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1962/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1963/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text +data/AB/1964/02_extractedxml.tar.gz filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/3247698ec80e42bea4f8843c9441d924_python.cwl b/.renku/workflow/3247698ec80e42bea4f8843c9441d924_python.cwl new file mode 100644 index 00000000..f024c7fc --- /dev/null +++ b/.renku/workflow/3247698ec80e42bea4f8843c9441d924_python.cwl @@ -0,0 +1,51 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_extract_origxml.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1964/00_rawpdfs.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: data/AB/1964/02_extractedxml.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_3) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1964 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1964/02_extractedxml.tar.gz b/data/AB/1964/02_extractedxml.tar.gz new file mode 100644 index 00000000..abdf2882 --- /dev/null +++ b/data/AB/1964/02_extractedxml.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:add98452d5248209f7c7eaed6a166e7d270546296abc04338fd1cd3a4f08e322 +size 126264284 -- GitLab