From 21514ed8ad59b4acd0b196206ad583467278aa63 Mon Sep 17 00:00:00 2001
From: Lili Gasser <gasserli@ethz.ch>
Date: Mon, 21 Jan 2019 14:09:33 +0000
Subject: [PATCH] renku run python src/python/run_correct_meta.py
data/AB//1982/01_rawmeta.tar.gz data/AB//1982/03_correctedmeta.tar.gz
---
.gitattributes | 1 +
...97516fff03547cab45588e4bc668a18_python.cwl | 51 +++++++++++++++++++
data/AB/1982/03_correctedmeta.tar.gz | 3 ++
3 files changed, 55 insertions(+)
create mode 100644 .renku/workflow/897516fff03547cab45588e4bc668a18_python.cwl
create mode 100644 data/AB/1982/03_correctedmeta.tar.gz
diff --git a/.gitattributes b/.gitattributes
index 77527440..b32f6bf5 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -225,3 +225,4 @@ data/AB/1978/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1979/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1980/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
data/AB/1981/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
+data/AB/1982/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text
diff --git a/.renku/workflow/897516fff03547cab45588e4bc668a18_python.cwl b/.renku/workflow/897516fff03547cab45588e4bc668a18_python.cwl
new file mode 100644
index 00000000..717cd25f
--- /dev/null
+++ b/.renku/workflow/897516fff03547cab45588e4bc668a18_python.cwl
@@ -0,0 +1,51 @@
+arguments: []
+baseCommand:
+- python
+class: CommandLineTool
+cwlVersion: v1.0
+hints: []
+inputs:
+ input_1:
+ default:
+ class: File
+ path: ../../src/python/run_correct_meta.py
+ inputBinding:
+ position: 1
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: File
+ input_2:
+ default:
+ class: File
+ path: ../../data/AB/1982/01_rawmeta.tar.gz
+ inputBinding:
+ position: 2
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: File
+ input_3:
+ default: data/AB/1982/03_correctedmeta.tar.gz
+ inputBinding:
+ position: 3
+ separate: true
+ shellQuote: true
+ streamable: false
+ type: string
+outputs:
+ output_0:
+ outputBinding:
+ glob: $(inputs.input_3)
+ streamable: false
+ type: File
+permanentFailCodes: []
+requirements:
+- class: InlineJavascriptRequirement
+- class: InitialWorkDirRequirement
+ listing:
+ - entry: '$({"listing": [], "class": "Directory"})'
+ entryname: data/AB/1982
+ writable: true
+successCodes: []
+temporaryFailCodes: []
diff --git a/data/AB/1982/03_correctedmeta.tar.gz b/data/AB/1982/03_correctedmeta.tar.gz
new file mode 100644
index 00000000..af7d1bfb
--- /dev/null
+++ b/data/AB/1982/03_correctedmeta.tar.gz
@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:8dac68e8aa1646cbc72e69e66c964285d872ae77a9cbeedc696de4a35bffad05
+size 1515520
--
GitLab