From 12de8e6fdc29e537067c788a4ca5581741cb4e5c Mon Sep 17 00:00:00 2001 From: Luis Salamanca <luis.salamanca@sdsc.ethz.ch> Date: Fri, 7 Dec 2018 17:53:03 +0000 Subject: [PATCH] renku run python src/python/run_correctxml.py data/AB//1912/02_extractedxml.tar.gz data/AB//1912/04_correctedxml.tar.gz --- ...158109e871f49cf8d4bfde41bb16960_python.cwl | 51 +++++++++++++++++++ data/AB/1912/04_correctedxml.tar.gz | 4 +- 2 files changed, 53 insertions(+), 2 deletions(-) create mode 100644 .renku/workflow/c158109e871f49cf8d4bfde41bb16960_python.cwl diff --git a/.renku/workflow/c158109e871f49cf8d4bfde41bb16960_python.cwl b/.renku/workflow/c158109e871f49cf8d4bfde41bb16960_python.cwl new file mode 100644 index 00000000..b6895321 --- /dev/null +++ b/.renku/workflow/c158109e871f49cf8d4bfde41bb16960_python.cwl @@ -0,0 +1,51 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_correctxml.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1912/02_extractedxml.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: data/AB/1912/04_correctedxml.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_3) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1912 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1912/04_correctedxml.tar.gz b/data/AB/1912/04_correctedxml.tar.gz index 038f7f35..aac56334 100644 --- a/data/AB/1912/04_correctedxml.tar.gz +++ b/data/AB/1912/04_correctedxml.tar.gz @@ -1,3 +1,3 @@ version https://git-lfs.github.com/spec/v1 -oid sha256:e4a476c9f156cde8b4cdb0e2ef425f68e589c9390208b26ace3e0a4ea50dcd9c -size 2824051 +oid sha256:a640323e0f606f983e33bb767f76aebc8dd17364779fe5e7beeb116b450a3e7e +size 2822788 -- GitLab