diff --git a/.gitattributes b/.gitattributes index 9e5cb9d2d27272d55e8fb648cec8a723103d602d..a17a7ba33e66e9fde9060eb3dd0bdd92ee166740 100644 --- a/.gitattributes +++ b/.gitattributes @@ -51,3 +51,4 @@ data/AB/1904/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1905/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1906/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1907/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text +data/AB/1908/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/c7de76e7eed1405baa11c763ba94ba60_python.cwl b/.renku/workflow/c7de76e7eed1405baa11c763ba94ba60_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..9db34db30446ac14b1d69c1774d9d166d6feb665 --- /dev/null +++ b/.renku/workflow/c7de76e7eed1405baa11c763ba94ba60_python.cwl @@ -0,0 +1,51 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_correct_meta.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1908/01_rawmeta.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: data/AB/1908/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_3) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1908 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1908/03_correctedmeta.tar.gz b/data/AB/1908/03_correctedmeta.tar.gz new file mode 100644 index 0000000000000000000000000000000000000000..d531b6a6870f6e0a3abba5b2d62eb6b71d8574fe --- /dev/null +++ b/data/AB/1908/03_correctedmeta.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d94fa9cd79ec61169d3283417524fec66642421a5d2cd7517e41a1ff85795fe5 +size 184320