diff --git a/.gitattributes b/.gitattributes index be5417d7c365e6769d7db0ccd6408198bb1e736b..0e7a2c9e4cd36c1a7904de8152e62111857181fa 100644 --- a/.gitattributes +++ b/.gitattributes @@ -177,3 +177,4 @@ data/AB/1930/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1931/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1932/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text data/AB/1933/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text +data/AB/1934/03_correctedmeta.tar.gz filter=lfs diff=lfs merge=lfs -text diff --git a/.renku/workflow/9c51307afcbf443386676e677ecac23c_python.cwl b/.renku/workflow/9c51307afcbf443386676e677ecac23c_python.cwl new file mode 100644 index 0000000000000000000000000000000000000000..0bf5b86adc2e4d1a2799ee1add09898f913071c1 --- /dev/null +++ b/.renku/workflow/9c51307afcbf443386676e677ecac23c_python.cwl @@ -0,0 +1,51 @@ +arguments: [] +baseCommand: +- python +class: CommandLineTool +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../src/python/run_correct_meta.py + inputBinding: + position: 1 + separate: true + shellQuote: true + streamable: false + type: File + input_2: + default: + class: File + path: ../../data/AB/1934/01_rawmeta.tar.gz + inputBinding: + position: 2 + separate: true + shellQuote: true + streamable: false + type: File + input_3: + default: data/AB/1934/03_correctedmeta.tar.gz + inputBinding: + position: 3 + separate: true + shellQuote: true + streamable: false + type: string +outputs: + output_0: + outputBinding: + glob: $(inputs.input_3) + streamable: false + type: File +permanentFailCodes: [] +requirements: +- class: InlineJavascriptRequirement +- class: InitialWorkDirRequirement + listing: + - entry: '$({"listing": [], "class": "Directory"})' + entryname: data/AB/1934 + writable: true +successCodes: [] +temporaryFailCodes: [] diff --git a/data/AB/1934/03_correctedmeta.tar.gz b/data/AB/1934/03_correctedmeta.tar.gz new file mode 100644 index 0000000000000000000000000000000000000000..51dce9885f43f2aa887750a390e9a07efa10fc5c --- /dev/null +++ b/data/AB/1934/03_correctedmeta.tar.gz @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:38853b4c67722b13cbbf7727978b738e8de4c71cc1634157be248f180dadf7bf +size 358400