diff --git a/.renku/workflow/5df0af1d8b3843f58c4370113f8c38d5.cwl b/.renku/workflow/5df0af1d8b3843f58c4370113f8c38d5.cwl new file mode 100644 index 0000000000000000000000000000000000000000..e7f0a610bad8951511205825b44d631a39ae7c00 --- /dev/null +++ b/.renku/workflow/5df0af1d8b3843f58c4370113f8c38d5.cwl @@ -0,0 +1,48 @@ +class: Workflow +cwlVersion: v1.0 +hints: [] +inputs: + input_1: + default: + class: File + path: ../../notebooks/openzh-covid-19-dashboard.ipynb + streamable: false + type: File + input_2: + default: runs/openzh-covid-19-dashboard.run.ipynb + streamable: false + type: string + input_3: + default: data_path + streamable: false + type: string + input_4: + default: + class: Directory + listing: [] + path: /tmp/covid-19-public-data/data/openzh-covid-19 + streamable: false + type: Directory + input_5: + default: + class: File + path: ../../data/ch-population-statistics/ch-population-by-age-canton.xls + streamable: false + type: File +outputs: + output_0: + outputSource: step_1/output_0 + streamable: false + type: File +requirements: [] +steps: + step_1: + in: + input_1: input_1 + input_2: input_2 + input_3: input_3 + input_4: input_4 + input_5: input_5 + out: + - output_0 + run: 0415b23203ef422185f0ecf77290cbd3_papermill.cwl diff --git a/runs/openzh-covid-19-dashboard.run.ipynb b/runs/openzh-covid-19-dashboard.run.ipynb index 795d0663f1809dbc71a1114900d1d21a1928d1e7..11351382fdc6fc44a109883b2387b3d116abdd34 100644 --- a/runs/openzh-covid-19-dashboard.run.ipynb +++ b/runs/openzh-covid-19-dashboard.run.ipynb @@ -8,10 +8,10 @@ "source_hidden": true }, "papermill": { - "duration": 0.492257, - "end_time": "2020-03-30T08:29:19.821234", + "duration": 0.519443, + "end_time": "2020-03-30T19:55:51.390368", "exception": false, - "start_time": "2020-03-30T08:29:19.328977", + "start_time": "2020-03-30T19:55:50.870925", "status": "completed" }, "tags": [] @@ -33,10 +33,10 @@ "source_hidden": true }, "papermill": { - "duration": 0.015823, - "end_time": "2020-03-30T08:29:19.844245", + "duration": 0.027105, + "end_time": "2020-03-30T19:55:51.435016", "exception": false, - "start_time": "2020-03-30T08:29:19.828422", + "start_time": "2020-03-30T19:55:51.407911", "status": "completed" }, "tags": [ @@ -57,10 +57,10 @@ "source_hidden": true }, "papermill": { - "duration": 0.019119, - "end_time": "2020-03-30T08:29:19.871598", + "duration": 0.024213, + "end_time": "2020-03-30T19:55:51.475809", "exception": false, - "start_time": "2020-03-30T08:29:19.852479", + "start_time": "2020-03-30T19:55:51.451596", "status": "completed" }, "tags": [ @@ -70,7 +70,7 @@ "outputs": [], "source": [ "# Parameters\n", - "data_path = \"/tmp/d101fjlo/data/openzh-covid-19\"\n" + "data_path = \"/tmp/z1imvmn7/data/openzh-covid-19\"\n" ] }, { @@ -81,10 +81,10 @@ "source_hidden": true }, "papermill": { - "duration": 0.025259, - "end_time": "2020-03-30T08:29:19.915596", + "duration": 0.024404, + "end_time": "2020-03-30T19:55:51.511038", "exception": false, - "start_time": "2020-03-30T08:29:19.890337", + "start_time": "2020-03-30T19:55:51.486634", "status": "completed" }, "tags": [] @@ -105,10 +105,10 @@ "cell_type": "markdown", "metadata": { "papermill": { - "duration": 0.007594, - "end_time": "2020-03-30T08:29:19.933650", + "duration": 0.007813, + "end_time": "2020-03-30T19:55:51.529910", "exception": false, - "start_time": "2020-03-30T08:29:19.926056", + "start_time": "2020-03-30T19:55:51.522097", "status": "completed" }, "tags": [] @@ -129,10 +129,10 @@ "source_hidden": true }, "papermill": { - "duration": 0.139088, - "end_time": "2020-03-30T08:29:20.081218", + "duration": 0.3141, + "end_time": "2020-03-30T19:55:51.851948", "exception": false, - "start_time": "2020-03-30T08:29:19.942130", + "start_time": "2020-03-30T19:55:51.537848", "status": "completed" }, "tags": [] @@ -158,10 +158,10 @@ "source_hidden": true }, "papermill": { - "duration": 25.041123, - "end_time": "2020-03-30T08:29:45.139565", + "duration": 25.019446, + "end_time": "2020-03-30T19:56:16.888567", "exception": false, - "start_time": "2020-03-30T08:29:20.098442", + "start_time": "2020-03-30T19:55:51.869121", "status": "completed" }, "tags": [] @@ -200,10 +200,10 @@ "source_hidden": true }, "papermill": { - "duration": 0.021929, - "end_time": "2020-03-30T08:29:45.169487", + "duration": 0.036298, + "end_time": "2020-03-30T19:56:16.942866", "exception": false, - "start_time": "2020-03-30T08:29:45.147558", + "start_time": "2020-03-30T19:56:16.906568", "status": "completed" }, "tags": [] @@ -232,10 +232,10 @@ "cell_type": "markdown", "metadata": { "papermill": { - "duration": 0.006827, - "end_time": "2020-03-30T08:29:45.184465", + "duration": 0.009333, + "end_time": "2020-03-30T19:56:16.968178", "exception": false, - "start_time": "2020-03-30T08:29:45.177638", + "start_time": "2020-03-30T19:56:16.958845", "status": "completed" }, "tags": [] @@ -252,10 +252,10 @@ "source_hidden": true }, "papermill": { - "duration": 0.173201, - "end_time": "2020-03-30T08:29:45.364347", + "duration": 0.17697, + "end_time": "2020-03-30T19:56:17.152351", "exception": false, - "start_time": "2020-03-30T08:29:45.191146", + "start_time": "2020-03-30T19:56:16.975381", "status": "completed" }, "tags": [] @@ -265,10 +265,10 @@ "data": { "text/html": [ "\n", - "<div id=\"altair-viz-9e54d5bc212048678e0cb87c65b69e76\"></div>\n", + "<div id=\"altair-viz-c7d7d6d9e5c44153a2b51e3afa3faac5\"></div>\n", "<script type=\"text/javascript\">\n", " (function(spec, embedOpt){\n", - " const outputDiv = document.getElementById(\"altair-viz-9e54d5bc212048678e0cb87c65b69e76\");\n", + " const outputDiv = document.getElementById(\"altair-viz-c7d7d6d9e5c44153a2b51e3afa3faac5\");\n", " const paths = {\n", " \"vega\": \"https://cdn.jsdelivr.net/npm//vega@5?noext\",\n", " \"vega-lib\": \"https://cdn.jsdelivr.net/npm//vega-lib?noext\",\n", @@ -309,7 +309,7 @@ " .catch(showError)\n", " .then(() => displayChart(vegaEmbed));\n", " }\n", - " })({\"config\": {\"view\": 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