From f308c70c7c6d0de0ede12b3c5c3879635e5c0dc9 Mon Sep 17 00:00:00 2001 From: Rok Roskar <rok.roskar@sdsc.ethz.ch> Date: Thu, 27 May 2021 18:31:34 +0200 Subject: [PATCH] renku migrate: committing migrated workflow --- .renku/activity_index.yaml | 8 + ...8991d48d4210a53c0c39e5b89d13_migrated.yaml | 434 ++++++++++++++++++ .../aa85fdd7ef5d4a1a9aa9be48a9668b35.cwl | 120 ----- 3 files changed, 442 insertions(+), 120 deletions(-) create mode 100644 .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml delete mode 100644 .renku/workflow/aa85fdd7ef5d4a1a9aa9be48a9668b35.cwl diff --git a/.renku/activity_index.yaml b/.renku/activity_index.yaml index 3cbfb2d57..b539d770c 100644 --- a/.renku/activity_index.yaml +++ b/.renku/activity_index.yaml @@ -544,6 +544,8 @@ data/covidtracking: - .renku/workflow/9ca6bd5f164147168799ac208c031526_migrated.yaml eba5afe84714da575d74cf8be4ca0fd510f40170: - .renku/workflow/053f4a58c83a40038a0fbe7f7808a182_migrated.yaml + ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7: + - .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml ee05f198926f0f0382037e26d0aec8eeeaf7dc0b: - .renku/workflow/3fe21661cbdc4f349746f15f98693c5e_migrated.yaml ee8e770709c39a057c839f4ddea9beb561906f04: @@ -1031,6 +1033,8 @@ data/covidtracking/states-daily.json: - .renku/workflow/9ca6bd5f164147168799ac208c031526_migrated.yaml eba5afe84714da575d74cf8be4ca0fd510f40170: - .renku/workflow/053f4a58c83a40038a0fbe7f7808a182_migrated.yaml + ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7: + - .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml ee05f198926f0f0382037e26d0aec8eeeaf7dc0b: - .renku/workflow/3fe21661cbdc4f349746f15f98693c5e_migrated.yaml ee8e770709c39a057c839f4ddea9beb561906f04: @@ -1516,6 +1520,8 @@ data/covidtracking/states-metadata.json: - .renku/workflow/9ca6bd5f164147168799ac208c031526_migrated.yaml eba5afe84714da575d74cf8be4ca0fd510f40170: - .renku/workflow/053f4a58c83a40038a0fbe7f7808a182_migrated.yaml + ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7: + - .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml ee8e770709c39a057c839f4ddea9beb561906f04: - .renku/workflow/eb3251c26c1f433089c3d3d1e510f59c_migrated.yaml eec9b813197cb50e3712a6b0f82a5ae016dbbe09: @@ -3010,6 +3016,8 @@ runs/download-covidtracking-data.runs.ipynb: - .renku/workflow/9ca6bd5f164147168799ac208c031526_migrated.yaml eba5afe84714da575d74cf8be4ca0fd510f40170: - .renku/workflow/053f4a58c83a40038a0fbe7f7808a182_migrated.yaml + ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7: + - .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml ee05f198926f0f0382037e26d0aec8eeeaf7dc0b: - .renku/workflow/3fe21661cbdc4f349746f15f98693c5e_migrated.yaml ee8e770709c39a057c839f4ddea9beb561906f04: diff --git a/.renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml b/.renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml new file mode 100644 index 000000000..6955d9526 --- /dev/null +++ b/.renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml @@ -0,0 +1,434 @@ +- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + '@type': + - http://purl.org/wf4ever/wfprov#WorkflowEngine + - http://www.w3.org/ns/prov#SoftwareAgent + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': renku 0.10.4 +- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + '@type': + - http://purl.org/wf4ever/wfprov#WorkflowEngine + - http://www.w3.org/ns/prov#SoftwareAgent + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': renku 0.15.1 +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + '@type': + - http://purl.org/wf4ever/wfprov#ProcessRun + - http://purl.org/wf4ever/wfprov#WorkflowRun + - http://www.w3.org/ns/prov#Activity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#comment: + - '@value': renku rerun data/covidtracking/states-metadata.json data/covidtracking/states-daily.json + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml@ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml + http://www.w3.org/ns/prov#endedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-12-09T07:41:01+00:00' + http://www.w3.org/ns/prov#influenced: [] + http://www.w3.org/ns/prov#qualifiedAssociation: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/association + http://www.w3.org/ns/prov#qualifiedUsage: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/inputs/1 + http://www.w3.org/ns/prov#startedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-12-09T07:41:01+00:00' + http://www.w3.org/ns/prov#wasAssociatedWith: + - '@id': mailto:beepbop@example.com + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + http://www.w3.org/ns/prov#wasInformedBy: + - '@id': https://localhost/activities/commit/fb59b90967905d04cf1a522a839435957057ca7a +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/association + '@type': + - http://www.w3.org/ns/prov#Association + http://www.w3.org/ns/prov#agent: + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + http://www.w3.org/ns/prov#hadPlan: + - '@id': https://renkulab.io/runs/03ac3adfd26e7424f07a49238908910a5e914b27 +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/inputs/1 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_1/inputs/3 +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1 + '@type': + - http://purl.org/wf4ever/wfprov#ProcessRun + - http://www.w3.org/ns/prov#Activity + http://purl.org/wf4ever/wfprov#wasPartOfWorkflowRun: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#comment: + - '@value': renku rerun data/covidtracking/states-metadata.json data/covidtracking/states-daily.json + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml@ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml + http://www.w3.org/ns/prov#endedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-12-09T07:41:01+00:00' + http://www.w3.org/ns/prov#influenced: [] + http://www.w3.org/ns/prov#qualifiedAssociation: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/association + http://www.w3.org/ns/prov#qualifiedUsage: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/inputs/3 + http://www.w3.org/ns/prov#startedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-12-09T07:41:01+00:00' + http://www.w3.org/ns/prov#wasAssociatedWith: + - '@id': mailto:beepbop@example.com + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + http://www.w3.org/ns/prov#wasInformedBy: + - '@id': https://localhost/activities/commit/fb59b90967905d04cf1a522a839435957057ca7a + https://swissdatasciencecenter.github.io/renku-ontology#hasRunParameter: [] +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/association + '@type': + - http://www.w3.org/ns/prov#Association + http://www.w3.org/ns/prov#agent: + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + http://www.w3.org/ns/prov#hadPlan: + - '@id': https://renkulab.io/runs/5a314a85f1d1f7292d4e94e79eaeba3582abba91 +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/inputs/3 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb + http://www.w3.org/ns/prov#hadRole: + - '@value': inputs/3 +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/outputs/2 + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1 + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#hadRole: + - '@value': outputs/2 +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/outputs/4 + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1 + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#hadRole: + - '@value': outputs/4 +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/tree/data/covidtracking/states-daily.json + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 +- '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/tree/data/covidtracking/states-metadata.json + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 +- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Collection + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking + http://www.w3.org/ns/prov#hadMember: + - '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-daily.json + - '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-metadata.json +- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-daily.json + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking/states-daily.json@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking/states-daily.json +- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-metadata.json + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking/states-metadata.json@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking/states-metadata.json +- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/runs/download-covidtracking-data.runs.ipynb + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': runs/download-covidtracking-data.runs.ipynb@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658 + http://www.w3.org/ns/prov#atLocation: + - '@value': runs/download-covidtracking-data.runs.ipynb +- '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': notebooks/process/download-covidtracking-data.ipynb@d754df040a4bf8f7cb7ae6ed4151830f9bb0f520 + http://www.w3.org/ns/prov#atLocation: + - '@value': notebooks/process/download-covidtracking-data.ipynb +- '@id': https://renkulab.io/blob/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/data/covidtracking + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Collection + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking@ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking + http://www.w3.org/ns/prov#hadMember: + - '@id': https://renkulab.io/blob/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/data/covidtracking/states-daily.json + - '@id': https://renkulab.io/blob/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/data/covidtracking/states-metadata.json + http://www.w3.org/ns/prov#qualifiedGeneration: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/outputs/2 +- '@id': https://renkulab.io/blob/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/data/covidtracking/states-daily.json + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking/states-daily.json@ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking/states-daily.json + http://www.w3.org/ns/prov#qualifiedGeneration: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/tree/data/covidtracking/states-daily.json +- '@id': https://renkulab.io/blob/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/data/covidtracking/states-metadata.json + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking/states-metadata.json@ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking/states-metadata.json + http://www.w3.org/ns/prov#qualifiedGeneration: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/tree/data/covidtracking/states-metadata.json +- '@id': https://renkulab.io/blob/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/runs/download-covidtracking-data.runs.ipynb + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': runs/download-covidtracking-data.runs.ipynb@ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#atLocation: + - '@value': runs/download-covidtracking-data.runs.ipynb + http://www.w3.org/ns/prov#qualifiedGeneration: + - '@id': https://localhost/activities/commit/ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7/steps/step_1/outputs/4 +- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + '@type': + - http://schema.org/Project + - http://www.w3.org/ns/prov#Location + http://schema.org/agent: + - '@value': pre-0.11.0 + http://schema.org/creator: + - '@id': mailto:cramakri@ethz.ch + http://schema.org/dateCreated: + - '@value': '2020-03-11T21:43:12.736000+00:00' + http://schema.org/name: + - '@value': covid-19-dashboard + http://schema.org/schemaVersion: + - '@value': '4' + https://swissdatasciencecenter.github.io/renku-ontology#automatedTemplateUpdate: + - '@value': false + https://swissdatasciencecenter.github.io/renku-ontology#immutableTemplateFiles: [] +- '@id': https://renkulab.io/runs/03ac3adfd26e7424f07a49238908910a5e914b27 + '@type': + - http://www.w3.org/ns/prov#Entity + - http://www.w3.org/ns/prov#Plan + - https://swissdatasciencecenter.github.io/renku-ontology#Run + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://schema.org/keywords: [] + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/aa85fdd7ef5d4a1a9aa9be48a9668b35.cwl@ed7c097b8b468fa182f0efefd2cd9f63e7a2c8c7 + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/961c8991d48d4210a53c0c39e5b89d13_migrated.yaml + https://swissdatasciencecenter.github.io/renku-ontology#hasArguments: [] + https://swissdatasciencecenter.github.io/renku-ontology#hasInputs: + - '@id': https://renkulab.io/runs/03ac3adfd26e7424f07a49238908910a5e914b27/steps/step_1/inputs/3 + https://swissdatasciencecenter.github.io/renku-ontology#hasOutputs: + - '@id': https://renkulab.io/runs/03ac3adfd26e7424f07a49238908910a5e914b27/steps/step_1/outputs/4 + - '@id': https://renkulab.io/runs/03ac3adfd26e7424f07a49238908910a5e914b27/steps/step_1/outputs/2 + https://swissdatasciencecenter.github.io/renku-ontology#hasRunParameters: [] + https://swissdatasciencecenter.github.io/renku-ontology#hasSubprocess: + - 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input_1: - default: states-metadata.json - streamable: false - type: string - input_2: - default: out_folder - streamable: false - type: string - input_3: - default: data/covidtracking - streamable: false - type: string - input_4: - default: - class: File - path: ../../notebooks/process/download-covidtracking-data.ipynb - streamable: false - type: File - input_5: - default: runs/download-covidtracking-data.runs.ipynb - streamable: false - type: string - input_6: - default: states-daily.json - streamable: false - type: string -outputs: - output_0: - outputSource: step_2/output_1 - streamable: false - type: Directory - output_2: - outputSource: step_2/output_0 - streamable: false - type: File -requirements: [] -steps: - step_1: - in: - filename: input_1 - input_directory: step_2/output_1 - out: - - output_file - run: - arguments: [] - baseCommand: - - 'true' - class: CommandLineTool - cwlVersion: v1.0 - hints: [] - inputs: - filename: - default: states-metadata.json - streamable: false - type: string - input_directory: - streamable: false - type: Directory - outputs: - output_file: - outputBinding: - glob: $(inputs.filename) - streamable: false - type: File - permanentFailCodes: [] - requirements: - - &id001 - class: InlineJavascriptRequirement - - &id002 - class: InitialWorkDirRequirement - listing: $(inputs.input_directory.listing) - successCodes: [] - temporaryFailCodes: [] - step_2: - in: - input_1: input_2 - input_2: input_3 - input_3: input_4 - input_4: input_5 - out: - - output_0 - - output_1 - run: a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl - step_3: - in: - filename: input_6 - input_directory: step_2/output_1 - out: - - output_file - run: - arguments: [] - baseCommand: - - 'true' - class: CommandLineTool - cwlVersion: v1.0 - hints: [] - inputs: - filename: - default: states-daily.json - streamable: false - type: string - input_directory: - streamable: false - type: Directory - outputs: - output_file: - outputBinding: - glob: $(inputs.filename) - streamable: false - type: File - permanentFailCodes: [] - requirements: - - *id001 - - *id002 - successCodes: [] - temporaryFailCodes: [] -- GitLab