diff --git a/.renku/activity_index.yaml b/.renku/activity_index.yaml index b232fb5b570a2d07c87be30a7ba94c83a5b946c7..00ebee2ab864441d3d77ae831e8cdddbd1055a84 100644 --- a/.renku/activity_index.yaml +++ b/.renku/activity_index.yaml @@ -201,6 +201,8 @@ data/covidtracking: - .renku/workflow/b156b83c1c0043a7baf508f0294ca5bb_migrated.yaml 3d4135d5f878fdb2a78d8153953864f89bcae997: - .renku/workflow/8352b030a9534331be03e61b18a0f1fe_migrated.yaml + 3d681f741cd49bee0c593b70e1bd9f4c62dd8110: + - .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml 3e360d33102caac5578c18b4c818015ed78b3e78: - .renku/workflow/ee155d1c10354d5fa0899e800250b0e5_migrated.yaml 3e87830f46831a6998ca3779f6d0330faabba984: @@ -681,6 +683,8 @@ data/covidtracking/states-daily.json: - .renku/workflow/b156b83c1c0043a7baf508f0294ca5bb_migrated.yaml 3d4135d5f878fdb2a78d8153953864f89bcae997: - .renku/workflow/8352b030a9534331be03e61b18a0f1fe_migrated.yaml + 3d681f741cd49bee0c593b70e1bd9f4c62dd8110: + - .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml 3e360d33102caac5578c18b4c818015ed78b3e78: - .renku/workflow/ee155d1c10354d5fa0899e800250b0e5_migrated.yaml 3e87830f46831a6998ca3779f6d0330faabba984: @@ -1156,6 +1160,8 @@ data/covidtracking/states-metadata.json: - .renku/workflow/b156b83c1c0043a7baf508f0294ca5bb_migrated.yaml 3d4135d5f878fdb2a78d8153953864f89bcae997: - .renku/workflow/8352b030a9534331be03e61b18a0f1fe_migrated.yaml + 3d681f741cd49bee0c593b70e1bd9f4c62dd8110: + - .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml 3e360d33102caac5578c18b4c818015ed78b3e78: - .renku/workflow/ee155d1c10354d5fa0899e800250b0e5_migrated.yaml 3e87830f46831a6998ca3779f6d0330faabba984: @@ -2624,6 +2630,8 @@ runs/download-covidtracking-data.runs.ipynb: - .renku/workflow/b156b83c1c0043a7baf508f0294ca5bb_migrated.yaml 3d4135d5f878fdb2a78d8153953864f89bcae997: - .renku/workflow/8352b030a9534331be03e61b18a0f1fe_migrated.yaml + 3d681f741cd49bee0c593b70e1bd9f4c62dd8110: + - .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml 3e360d33102caac5578c18b4c818015ed78b3e78: - .renku/workflow/ee155d1c10354d5fa0899e800250b0e5_migrated.yaml 3e87830f46831a6998ca3779f6d0330faabba984: diff --git a/.renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml b/.renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml new file mode 100644 index 0000000000000000000000000000000000000000..4283da822c7e9db5e809c02e1ecde351a5223657 --- /dev/null +++ b/.renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml @@ -0,0 +1,434 @@ +- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + '@type': + - http://purl.org/wf4ever/wfprov#WorkflowEngine + - http://www.w3.org/ns/prov#SoftwareAgent + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': renku 0.10.4 +- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + '@type': + - http://purl.org/wf4ever/wfprov#WorkflowEngine + - http://www.w3.org/ns/prov#SoftwareAgent + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': renku 0.15.1 +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + '@type': + - http://purl.org/wf4ever/wfprov#ProcessRun + - http://purl.org/wf4ever/wfprov#WorkflowRun + - http://www.w3.org/ns/prov#Activity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#comment: + - '@value': renku rerun data/covidtracking/states-metadata.json data/covidtracking/states-daily.json + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml@3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml + http://www.w3.org/ns/prov#endedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-12-01T07:37:05+00:00' + http://www.w3.org/ns/prov#influenced: [] + http://www.w3.org/ns/prov#qualifiedAssociation: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/association + http://www.w3.org/ns/prov#qualifiedUsage: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/inputs/1 + http://www.w3.org/ns/prov#startedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-12-01T07:37:05+00:00' + http://www.w3.org/ns/prov#wasAssociatedWith: + - '@id': mailto:beepbop@example.com + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + http://www.w3.org/ns/prov#wasInformedBy: + - '@id': https://localhost/activities/commit/c70672e2aa62c08d084e1c655a3d384a9dfc28a6 +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/association + '@type': + - http://www.w3.org/ns/prov#Association + http://www.w3.org/ns/prov#agent: + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + http://www.w3.org/ns/prov#hadPlan: + - '@id': https://renkulab.io/runs/3a9ef1684841e5548695c6d149deb4599697219f +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/inputs/1 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_1/inputs/3 +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1 + '@type': + - http://purl.org/wf4ever/wfprov#ProcessRun + - http://www.w3.org/ns/prov#Activity + http://purl.org/wf4ever/wfprov#wasPartOfWorkflowRun: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#comment: + - '@value': renku rerun data/covidtracking/states-metadata.json data/covidtracking/states-daily.json + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml@3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml + http://www.w3.org/ns/prov#endedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-12-01T07:37:05+00:00' + http://www.w3.org/ns/prov#influenced: [] + http://www.w3.org/ns/prov#qualifiedAssociation: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/association + http://www.w3.org/ns/prov#qualifiedUsage: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/inputs/3 + http://www.w3.org/ns/prov#startedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-12-01T07:37:05+00:00' + http://www.w3.org/ns/prov#wasAssociatedWith: + - '@id': mailto:beepbop@example.com + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + http://www.w3.org/ns/prov#wasInformedBy: + - '@id': https://localhost/activities/commit/c70672e2aa62c08d084e1c655a3d384a9dfc28a6 + https://swissdatasciencecenter.github.io/renku-ontology#hasRunParameter: [] +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/association + '@type': + - http://www.w3.org/ns/prov#Association + http://www.w3.org/ns/prov#agent: + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + http://www.w3.org/ns/prov#hadPlan: + - '@id': https://renkulab.io/runs/b98d03ac3d5b94dd96a80442e2b370c16e5c398b +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/inputs/3 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb + http://www.w3.org/ns/prov#hadRole: + - '@value': inputs/3 +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/outputs/2 + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1 + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#hadRole: + - '@value': outputs/2 +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/outputs/4 + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1 + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#hadRole: + - '@value': outputs/4 +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/tree/data/covidtracking/states-daily.json + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110 +- '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/tree/data/covidtracking/states-metadata.json + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110 +- '@id': https://renkulab.io/blob/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/data/covidtracking + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Collection + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking@3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking + http://www.w3.org/ns/prov#hadMember: + - '@id': https://renkulab.io/blob/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/data/covidtracking/states-daily.json + - '@id': https://renkulab.io/blob/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/data/covidtracking/states-metadata.json + http://www.w3.org/ns/prov#qualifiedGeneration: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/outputs/2 +- '@id': https://renkulab.io/blob/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/data/covidtracking/states-daily.json + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking/states-daily.json@3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking/states-daily.json + http://www.w3.org/ns/prov#qualifiedGeneration: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/tree/data/covidtracking/states-daily.json +- '@id': https://renkulab.io/blob/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/data/covidtracking/states-metadata.json + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking/states-metadata.json@3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking/states-metadata.json + http://www.w3.org/ns/prov#qualifiedGeneration: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/tree/data/covidtracking/states-metadata.json +- '@id': https://renkulab.io/blob/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/runs/download-covidtracking-data.runs.ipynb + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': runs/download-covidtracking-data.runs.ipynb@3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#atLocation: + - '@value': runs/download-covidtracking-data.runs.ipynb + http://www.w3.org/ns/prov#qualifiedGeneration: + - '@id': https://localhost/activities/commit/3d681f741cd49bee0c593b70e1bd9f4c62dd8110/steps/step_1/outputs/4 +- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Collection + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking + http://www.w3.org/ns/prov#hadMember: + - '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-daily.json + - '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-metadata.json +- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-daily.json + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking/states-daily.json@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking/states-daily.json +- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/data/covidtracking/states-metadata.json + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': data/covidtracking/states-metadata.json@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658 + http://www.w3.org/ns/prov#atLocation: + - '@value': data/covidtracking/states-metadata.json +- '@id': https://renkulab.io/blob/ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658/runs/download-covidtracking-data.runs.ipynb + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': runs/download-covidtracking-data.runs.ipynb@ccc37edffe6d9ca8ea4b8a229d1d20c42bc4b658 + http://www.w3.org/ns/prov#atLocation: + - '@value': runs/download-covidtracking-data.runs.ipynb +- '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb + '@type': + - http://purl.org/wf4ever/wfprov#Artifact + - http://www.w3.org/ns/prov#Entity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': notebooks/process/download-covidtracking-data.ipynb@d754df040a4bf8f7cb7ae6ed4151830f9bb0f520 + http://www.w3.org/ns/prov#atLocation: + - '@value': notebooks/process/download-covidtracking-data.ipynb +- '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + '@type': + - http://schema.org/Project + - http://www.w3.org/ns/prov#Location + http://schema.org/agent: + - '@value': pre-0.11.0 + http://schema.org/creator: + - '@id': mailto:cramakri@ethz.ch + http://schema.org/dateCreated: + - '@value': '2020-03-11T21:43:12.736000+00:00' + http://schema.org/name: + - '@value': covid-19-dashboard + http://schema.org/schemaVersion: + - '@value': '4' + https://swissdatasciencecenter.github.io/renku-ontology#automatedTemplateUpdate: + - '@value': false + https://swissdatasciencecenter.github.io/renku-ontology#immutableTemplateFiles: [] +- '@id': https://renkulab.io/runs/3a9ef1684841e5548695c6d149deb4599697219f + '@type': + - http://www.w3.org/ns/prov#Entity + - http://www.w3.org/ns/prov#Plan + - https://swissdatasciencecenter.github.io/renku-ontology#Run + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://schema.org/keywords: [] + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/fbace511124b4e699b2f666805684da3.cwl@3d681f741cd49bee0c593b70e1bd9f4c62dd8110 + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/9010ba8eb3e1461ab8b852604cd1d14d_migrated.yaml + https://swissdatasciencecenter.github.io/renku-ontology#hasArguments: [] + https://swissdatasciencecenter.github.io/renku-ontology#hasInputs: + - '@id': https://renkulab.io/runs/3a9ef1684841e5548695c6d149deb4599697219f/steps/step_1/inputs/3 + https://swissdatasciencecenter.github.io/renku-ontology#hasOutputs: + - '@id': https://renkulab.io/runs/3a9ef1684841e5548695c6d149deb4599697219f/steps/step_1/outputs/4 + - '@id': https://renkulab.io/runs/3a9ef1684841e5548695c6d149deb4599697219f/steps/step_1/outputs/2 + https://swissdatasciencecenter.github.io/renku-ontology#hasRunParameters: [] + https://swissdatasciencecenter.github.io/renku-ontology#hasSubprocess: + - '@id': https://renkulab.io/runs/3a9ef1684841e5548695c6d149deb4599697219f/subprocess/1 + https://swissdatasciencecenter.github.io/renku-ontology#successCodes: [] +- '@id': https://renkulab.io/runs/3a9ef1684841e5548695c6d149deb4599697219f/steps/step_1/inputs/3 + '@type': + - https://swissdatasciencecenter.github.io/renku-ontology#CommandInput + - https://swissdatasciencecenter.github.io/renku-ontology#CommandParameter + http://schema.org/defaultValue: + - '@value': notebooks/process/download-covidtracking-data.ipynb + http://schema.org/name: + - '@value': inject-paths-3 + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': Command Input "None" + https://swissdatasciencecenter.github.io/renku-ontology#consumes: + - '@id': https://renkulab.io/blob/d754df040a4bf8f7cb7ae6ed4151830f9bb0f520/notebooks/process/download-covidtracking-data.ipynb + https://swissdatasciencecenter.github.io/renku-ontology#position: + - '@value': 3 + https://swissdatasciencecenter.github.io/renku-ontology#prefix: + - 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input_1: - default: out_folder - streamable: false - type: string - input_2: - default: data/covidtracking - streamable: false - type: string - input_3: - default: - class: File - path: ../../notebooks/process/download-covidtracking-data.ipynb - streamable: false - type: File - input_4: - default: runs/download-covidtracking-data.runs.ipynb - streamable: false - type: string - input_5: - default: states-daily.json - streamable: false - type: string - input_6: - default: states-metadata.json - streamable: false - type: string -outputs: - output_1: - outputSource: step_1/output_1 - streamable: false - type: Directory - output_3: - outputSource: step_1/output_0 - streamable: false - type: File -requirements: [] -steps: - step_1: - in: - input_1: input_1 - input_2: input_2 - input_3: input_3 - input_4: input_4 - out: - - output_1 - - output_0 - run: a17d560c41a54f5aa307ce5f3c5effe5_papermill.cwl - step_2: - in: - filename: input_5 - input_directory: step_1/output_1 - out: - - output_file - run: - arguments: [] - baseCommand: - - 'true' - class: CommandLineTool - cwlVersion: v1.0 - hints: [] - inputs: - filename: - default: states-daily.json - streamable: false - type: string - input_directory: - streamable: false - type: Directory - outputs: - output_file: - outputBinding: - glob: $(inputs.filename) - streamable: false - type: File - permanentFailCodes: [] - requirements: - - &id001 - class: InlineJavascriptRequirement - - &id002 - class: InitialWorkDirRequirement - listing: $(inputs.input_directory.listing) - successCodes: [] - temporaryFailCodes: [] - step_3: - in: - filename: input_6 - input_directory: step_1/output_1 - out: - - output_file - run: - arguments: [] - baseCommand: - - 'true' - class: CommandLineTool - cwlVersion: v1.0 - hints: [] - inputs: - filename: - default: states-metadata.json - streamable: false - type: string - input_directory: - streamable: false - type: Directory - outputs: - output_file: - outputBinding: - glob: $(inputs.filename) - streamable: false - type: File - permanentFailCodes: [] - requirements: - - *id001 - - *id002 - successCodes: [] - temporaryFailCodes: []