diff --git a/Dockerfile b/Dockerfile index 4037aa43dac32dd3a8fd10200d050499170ae594..6e0e13c986a1cea58853ebc1794a93896715915f 100644 --- a/Dockerfile +++ b/Dockerfile @@ -23,12 +23,11 @@ RUN R -f /tmp/install.R COPY requirements.txt environment.yml /tmp/ RUN conda env update -q -f /tmp/environment.yml && \ /opt/conda/bin/pip install --ignore-installed -r /tmp/requirements.txt && \ - jupyter labextension install --no-build @jupyter-voila/jupyterlab-preview \ - @jupyter-widgets/jupyterlab-manager \ - @jupyterlab/celltags && \ + jupyter labextension install --no-build @jupyter-voila/jupyterlab-preview && \ + jupyter labextension install --no-build @jupyter-widgets/jupyterlab-manager && \ + jupyter lab build && \ conda clean -y --all && \ - conda env export -n "root" && \ - jupyter lab build + conda env export -n "root" # install our utilities package diff --git a/environment.yml b/environment.yml index 757a4f132c4f11a000e7133c578231393ca1efb2..5f61d4d62a6ae450d0d4b527f64c237d3cd84d67 100644 --- a/environment.yml +++ b/environment.yml @@ -7,3 +7,4 @@ dependencies: - bokeh=2.0.0=py37_0 - holoviews=1.13.0=py_0 - panel=0.9.3=py_0 + - jupyterlab~=2.0 diff --git a/notebooks/datasets_summary.ipynb b/notebooks/datasets_summary.ipynb index 7955695dfc2a13a62dbcef21726f4b58901a0f26..0e329bc23fdfcc6b0d137e73a9300fd7d439b84c 100644 --- a/notebooks/datasets_summary.ipynb +++ b/notebooks/datasets_summary.ipynb @@ -78,7 +78,11 @@ { "cell_type": "code", "execution_count": 5, - "metadata": {}, + "metadata": { + "tags": [ + "parameters" + ] + }, "outputs": [], "source": [ "data_path = \"../data\"\n", diff --git a/requirements.txt b/requirements.txt index 99397cd20b2bd0def17df52b55e82ff83bce1a07..2dc9be5bb50240605deb67cfef4c82e55469711a 100644 --- a/requirements.txt +++ b/requirements.txt @@ -38,12 +38,10 @@ jsonschema==3.2.0 jupyter-client==6.0.0 jupyter-core==4.6.3 jupyter-rsession-proxy==1.1 +jupyterlab_server>=1.1.0 jupyter-server-proxy==1.2.0 jupyter-telemetry==0.0.5 -jupyterhub==0.9.6 -jupyterlab==1.2.5 -jupyterlab-git==0.9.0 -jupyterlab-server==1.0.6 +jupyterlab-git==0.20.0rc0 kiwisolver==1.1.0 Mako==1.1.0 MarkupSafe==1.1.1 @@ -51,7 +49,7 @@ matplotlib==3.2.1 mistune==0.8.4 multidict==4.7.5 nbconvert==5.6.1 -nbdime==1.1.0 +nbdime~=2.0 nbformat==5.0.4 notebook==6.0.3 numpy==1.18.1