diff --git a/.renku/activity_index.yaml b/.renku/activity_index.yaml index 807be8d2f04c21792c61055e8e38ae92b42b8290..6dcc25d86383e36c4c9b30c3868983e80feb0e44 100644 --- a/.renku/activity_index.yaml +++ b/.renku/activity_index.yaml @@ -1958,6 +1958,8 @@ runs/Dashboard.run.ipynb: - .renku/workflow/0f5da9ad99fa4c66928bba9f7a0da96b_migrated.yaml 656ce2c06205fc3233b3b6dfe4b1f22468ff1ae7: - .renku/workflow/6a00a7ed813b465cab734e3205b80449_migrated.yaml + 67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a: + - .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml 67cc598d31785909fe774b796a2005a7723889ea: - .renku/workflow/a33aea4639b44bd2848e733e8f609e36_papermill.yaml 6e1d9b3b666bf73d18318af921541e0852fb767d: @@ -2352,6 +2354,8 @@ runs/covidtracking.run.ipynb: - .renku/workflow/5d55f5e39ab94fb6bb888d3a91533f81_migrated.yaml 656ce2c06205fc3233b3b6dfe4b1f22468ff1ae7: - .renku/workflow/6a00a7ed813b465cab734e3205b80449_migrated.yaml + 67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a: + - .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml 79d74f3e676285b0436fba25b4c03305ac011168: - .renku/workflow/70b7f6e334b640d7a59190511b00e2db_migrated.yaml 88bfe638fe325cd4ae49b3b6cfad9e6c695bdb72: @@ -2421,6 +2425,8 @@ runs/dataset_summary.run.ipynb: - .renku/workflow/03591762874446b3a40610d1b51a4b77_migrated.yaml 5367dfc97ed3e0cc99476b97255e0d6eb0befe3b: - .renku/workflow/bb8c2da0df5d422f942639a743e69f3f_migrated.yaml + 67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a: + - .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml 79d74f3e676285b0436fba25b4c03305ac011168: - .renku/workflow/70b7f6e334b640d7a59190511b00e2db_migrated.yaml 88bfe638fe325cd4ae49b3b6cfad9e6c695bdb72: diff --git a/.renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml b/.renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml new file mode 100644 index 0000000000000000000000000000000000000000..fdd75eaa89af23b8a0d6b7a3ea357a86ef83281d --- /dev/null +++ b/.renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml @@ -0,0 +1,9375 @@ +- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + '@type': + - http://purl.org/wf4ever/wfprov#WorkflowEngine + - http://www.w3.org/ns/prov#SoftwareAgent + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': renku 0.10.4 +- '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + '@type': + - http://purl.org/wf4ever/wfprov#WorkflowEngine + - http://www.w3.org/ns/prov#SoftwareAgent + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': renku 0.15.1 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a + '@type': + - http://purl.org/wf4ever/wfprov#ProcessRun + - http://purl.org/wf4ever/wfprov#WorkflowRun + - http://www.w3.org/ns/prov#Activity + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#comment: + - '@value': renku update --with-siblings + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml@67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml + http://www.w3.org/ns/prov#endedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-11-23T08:06:26+00:00' + http://www.w3.org/ns/prov#influenced: [] + http://www.w3.org/ns/prov#qualifiedAssociation: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/association + http://www.w3.org/ns/prov#qualifiedUsage: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/1 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/2 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/3 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/4 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/5 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/6 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/7 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/8 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/9 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/10 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/11 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/12 + http://www.w3.org/ns/prov#startedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-11-23T08:06:26+00:00' + http://www.w3.org/ns/prov#wasAssociatedWith: + - '@id': mailto:beepbop@example.com + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + http://www.w3.org/ns/prov#wasInformedBy: + - '@id': https://localhost/activities/commit/77f2290cd7f12d34ce8cd95aca0c1941a3473719 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/association + '@type': + - http://www.w3.org/ns/prov#Association + http://www.w3.org/ns/prov#agent: + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + http://www.w3.org/ns/prov#hadPlan: + - '@id': https://renkulab.io/runs/d1b01c12992153fcc7263444611d4c0b618edec5 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/1 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/873e396bcc24b2f296b7a8fe2a0e8af5c0e94870/notebooks/covidtracking.ipynb + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_1/inputs/1 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/10 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/3ed59d79e443662b56a3e17ba66ea896fa29b3c5/data/covid-19_jhu-csse + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_3/inputs/3 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/11 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/b092dca8866c940dd4ff119b7d76d163a1be6a65/data/covid-19_rates + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_3/inputs/5 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/12 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/be0cb6dc73bbbde45d4aab4e59d2d01e09801f11/data/geodata/geo_data.csv + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_3/inputs/7 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/2 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/77f2290cd7f12d34ce8cd95aca0c1941a3473719/data/covidtracking + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_1/inputs/4 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/3 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/cb66131be6674e0b2c6da3810b45dde7032dc361/data/atlas + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_1/inputs/6 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/4 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/a29dea56e8ae185dc1c28e254c31b4e46ef5fc1d/notebooks/datasets_summary.ipynb + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_2/inputs/1 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/5 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/3f26a785b8680dced0064d5cd00b9e4d75acd6e9/data/covid-19-spain + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_2/inputs/10 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/6 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/be18f95b9e90310ba750b0a830ef76b979bef266/data/covid-19-ecdc + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_2/inputs/12 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/7 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/db837cc3232bd5970d368a78e8def7d384ff2cab/data/covid-19-us-nyt + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_2/inputs/6 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/8 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/c6a6ff3972cdea5d0ff8b2b8e30ab86c8d7f95e9/data/covid-19-italy/dpc-covid19-ita-regioni.csv + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_2/inputs/8 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/inputs/9 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/b1cc748882c72c30a9b1bff32571532e4a669e2a/notebooks/Dashboard.ipynb + http://www.w3.org/ns/prov#hadRole: + - '@value': steps/step_3/inputs/10 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1 + '@type': + - http://purl.org/wf4ever/wfprov#ProcessRun + - http://www.w3.org/ns/prov#Activity + http://purl.org/wf4ever/wfprov#wasPartOfWorkflowRun: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#comment: + - '@value': renku update --with-siblings + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml@67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml + http://www.w3.org/ns/prov#endedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-11-23T08:06:26+00:00' + http://www.w3.org/ns/prov#influenced: [] + http://www.w3.org/ns/prov#qualifiedAssociation: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/association + http://www.w3.org/ns/prov#qualifiedUsage: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/inputs/1 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/inputs/4 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/inputs/6 + http://www.w3.org/ns/prov#startedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-11-23T08:06:26+00:00' + http://www.w3.org/ns/prov#wasAssociatedWith: + - '@id': mailto:beepbop@example.com + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + http://www.w3.org/ns/prov#wasInformedBy: + - '@id': https://localhost/activities/commit/77f2290cd7f12d34ce8cd95aca0c1941a3473719 + https://swissdatasciencecenter.github.io/renku-ontology#hasRunParameter: [] +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/association + '@type': + - http://www.w3.org/ns/prov#Association + http://www.w3.org/ns/prov#agent: + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.10.4 + http://www.w3.org/ns/prov#hadPlan: + - '@id': https://renkulab.io/runs/3050f5e2617d215dab5d3c8e8e111d747acfab95 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/inputs/1 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/6815d7fed6d1d3ccd5e70306be35b4803dee2cb9/notebooks/covidtracking.ipynb + http://www.w3.org/ns/prov#hadRole: + - '@value': inputs/1 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/inputs/4 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/eba5afe84714da575d74cf8be4ca0fd510f40170/data/covidtracking + http://www.w3.org/ns/prov#hadRole: + - '@value': inputs/4 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/inputs/6 + '@type': + - http://www.w3.org/ns/prov#Usage + http://www.w3.org/ns/prov#entity: + - '@id': https://renkulab.io/blob/cb66131be6674e0b2c6da3810b45dde7032dc361/data/atlas + http://www.w3.org/ns/prov#hadRole: + - '@value': inputs/6 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1/outputs/2 + '@type': + - http://www.w3.org/ns/prov#Generation + http://www.w3.org/ns/prov#activity: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_1 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a + http://www.w3.org/ns/prov#hadRole: + - '@value': outputs/2 +- '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_2 + '@type': + - http://purl.org/wf4ever/wfprov#ProcessRun + - http://www.w3.org/ns/prov#Activity + http://purl.org/wf4ever/wfprov#wasPartOfWorkflowRun: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a + http://schema.org/isPartOf: + - '@id': https://renkulab.io/projects/covid-19/covid-19-public-data + http://www.w3.org/2000/01/rdf-schema#comment: + - '@value': renku update --with-siblings + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml@67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a + http://www.w3.org/ns/prov#atLocation: + - '@value': .renku/workflow/2667d60a5d094b51be3fcf6b92f8da82_migrated.yaml + http://www.w3.org/ns/prov#endedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-11-23T08:06:26+00:00' + http://www.w3.org/ns/prov#influenced: [] + http://www.w3.org/ns/prov#qualifiedAssociation: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_2/association + http://www.w3.org/ns/prov#qualifiedUsage: + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_2/inputs/1 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_2/inputs/10 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_2/inputs/12 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_2/inputs/4 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_2/inputs/6 + - '@id': https://localhost/activities/commit/67cbdeaf9d570ff92fa08da837f3bccc91cf6e6a/steps/step_2/inputs/8 + http://www.w3.org/ns/prov#startedAtTime: + - '@type': http://www.w3.org/2001/XMLSchema#dateTime + '@value': '2020-11-23T08:06:26+00:00' + http://www.w3.org/ns/prov#wasAssociatedWith: + - '@id': mailto:beepbop@example.com + - '@id': https://github.com/swissdatasciencecenter/renku-python/tree/v0.15.1 + http://www.w3.org/ns/prov#wasInformedBy: + - 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'@value': 2 + https://swissdatasciencecenter.github.io/renku-ontology#process: + - '@id': https://renkulab.io/runs/808f9d4dd92bb09ee4af6ae0c935a7d6e22ad00d +- '@id': https://renkulab.io/runs/d1b01c12992153fcc7263444611d4c0b618edec5/subprocess/3 + '@type': + - https://swissdatasciencecenter.github.io/renku-ontology#OrderedSubprocess + https://swissdatasciencecenter.github.io/renku-ontology#index: + - '@value': 3 + https://swissdatasciencecenter.github.io/renku-ontology#process: + - '@id': https://renkulab.io/runs/3cdd4da864bd00ec5fd9c35b5bd30ada0d228d87 +- '@id': mailto:beepbop@example.com + '@type': + - http://schema.org/Person + - http://www.w3.org/ns/prov#Person + http://schema.org/email: + - '@value': beepbop@example.com + http://schema.org/name: + - '@value': CR (covid cron) + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': CR (covid cron) +- '@id': mailto:cramakri@ethz.ch + '@type': + - http://schema.org/Person + - http://www.w3.org/ns/prov#Person + http://schema.org/email: + - '@value': cramakri@ethz.ch + http://schema.org/name: + - '@value': Chandrasekhar Ramakrishnan + http://www.w3.org/2000/01/rdf-schema#label: + - '@value': Chandrasekhar Ramakrishnan diff --git a/.renku/workflow/3ea6e0eac80145d493c20e1210f5461d.cwl b/.renku/workflow/3ea6e0eac80145d493c20e1210f5461d.cwl deleted file mode 100644 index 1ec78d5a64740308f4f9bfcf05780a1c99f96681..0000000000000000000000000000000000000000 --- a/.renku/workflow/3ea6e0eac80145d493c20e1210f5461d.cwl +++ /dev/null @@ -1,211 +0,0 @@ -class: Workflow -cwlVersion: v1.0 -hints: [] -inputs: - input_1: - default: - class: File - path: ../../notebooks/covidtracking.ipynb - streamable: false - type: File - input_10: - default: - class: Directory - listing: [] - path: ../../data/covid-19-ecdc - streamable: false - type: Directory - input_11: - default: runs/dataset_summary.run.ipynb - streamable: false - type: string - input_12: - default: atlas_path - streamable: false - type: string - input_13: - default: - class: Directory - listing: [] - path: ../../data/atlas - streamable: false - type: Directory - input_14: - default: us_path - streamable: false - type: string - input_15: - default: - class: Directory - listing: [] - path: ../../data/covid-19-us-nyt - streamable: false - type: Directory - input_16: - default: italy_path - streamable: false - type: string - input_17: - default: - class: File - path: ../../data/covid-19-italy/dpc-covid19-ita-regioni.csv - streamable: false - type: File - input_18: - default: spain_path - streamable: false - type: string - input_19: - default: - class: File - path: ../../notebooks/Dashboard.ipynb - streamable: false - type: File - input_2: - default: runs/covidtracking.run.ipynb - streamable: false - type: string - input_20: - default: runs/Dashboard.run.ipynb - streamable: false - type: string - input_21: - default: ts_folder - streamable: false - type: string - input_22: - default: - class: Directory - listing: [] - path: ../../data/covid-19_jhu-csse - streamable: false - type: Directory - input_23: - default: rates_folder - streamable: false - type: string - input_24: - default: - class: Directory - listing: [] - path: ../../data/covid-19_rates - streamable: false - type: Directory - input_25: - default: geodata_path - streamable: false - type: string - input_26: - default: - class: File - path: ../../data/geodata/geo_data.csv - streamable: false - type: File - input_27: - default: atlas_path - streamable: false - type: string - input_28: - default: - class: Directory - listing: [] - path: ../../data/atlas - streamable: false - type: Directory - input_3: - default: data_path - streamable: false - type: string - input_4: - default: - class: Directory - listing: [] - path: ../../data/covidtracking - streamable: false - type: Directory - input_5: - default: atlas_path - streamable: false - type: string - input_6: - default: - class: Directory - listing: [] - path: ../../data/atlas - streamable: false - type: Directory - input_7: - default: - class: File - path: ../../notebooks/datasets_summary.ipynb - streamable: false - type: File - input_8: - default: - class: Directory - listing: [] - path: ../../data/covid-19-spain - streamable: false - type: Directory - input_9: - default: ecdc_path - streamable: false - type: string -outputs: - output_0: - outputSource: step_1/output_0 - streamable: false - type: File - output_1: - outputSource: step_3/output_0 - streamable: false - type: File - output_2: - outputSource: step_2/output_0 - streamable: false - type: File -requirements: [] -steps: - step_1: - in: - input_1: input_1 - input_2: input_2 - input_3: input_3 - input_4: input_4 - input_5: input_5 - input_6: input_6 - out: - - output_0 - run: 2fba4568d8784fb99872b6c8a35f66b9_papermill.cwl - step_2: - in: - input_1: input_7 - input_10: input_8 - input_11: input_9 - input_12: input_10 - input_2: input_11 - input_3: input_12 - input_4: input_13 - input_5: input_14 - input_6: input_15 - input_7: input_16 - input_8: input_17 - input_9: input_18 - out: - - output_0 - run: e0c6511bd8234efe8a19405f1145e990_papermill.cwl - step_3: - in: - input_10: input_19 - input_11: input_20 - input_2: input_21 - input_3: input_22 - input_4: input_23 - input_5: input_24 - input_6: input_25 - input_7: input_26 - input_8: input_27 - input_9: input_28 - out: - - output_0 - run: edeae7a3f9bd41579941a5f9b0eaf2aa_papermill.cwl